Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5048g00012 ATGTCCCAAGTTAGAGATTCTGCAATAAAGCTTTTTGGAGCAGATATTCATGATATTCATTTTCCCATTAAGTCAACCACCCACTTCACAGATTTACACTCTCTCACTCAGATTCAGCCTCTGCCTCAACCCATTATCGTCATGGTCATGCCATTCAACCCTTCTTTATGCTTTCTTAATAGTGTGCTGCAGATGATTGGTGGGGCTTGTGGTGCCAATAATGGTCCTAAATTGCAGAATGGACTTGAAGAATCAACTAATGATGAAGTGGATGTTCCTTTGAATGAAGTATCTAGCAAAGAGACTGATCCTCAAGAAGATGGTAATTGTAACAATATTTACAAAAATCCTACGCCGAAACTGGTGGCGAAAGTAGTTCATAGAACTAAAGAACACAGGAATGGTAAAAGAGATATTGATCATCAAGAAAAAGTTTTCAAGAAGCCGGACAAGGTCCTGCCATGTCCTCGCTGCAATAGTTCAGAAACAAAGTTTTGCTACTTCAACAATTACAATGTCAACCAACCTAGGCATTTCTGTAAAAATTGCCAGAGATATTGGACAGCTGGGGGGACAATTAGAAACGTTCCTATTGGGGCCGGTAAGCGTAAGAATAAGCATTCGGCTTCTCAGCATTGTCAGATACCTGTGACTCCTGATGCTGCATCTGAGATCCAGTCAGATTCCAAACCTGCTAGTGATATGCTACTCTCATCTAATGGACTTTCTATGACTTCAAGACCTGTCAAAGTAATGGAGAATGTAACAAGTCTCATGGAGGAAGCTCCTCTTAGTGAATCCTTAGAAACTGTGTTAAGTCTCAATGGCCAGACAAATATTGAAGTTGATTCTTCCACCATCAAAGATGATGGTGAGGAGCCTTCCAGCTCTTCCATGAGGTCTAATGAAATAGAGCAGGTTGGTTTGACACAACACTCTAATGGTTTAATTCCTTTACACTCATTTCATTATCATCCTGTCCCTTCATGGTCTTACCAATGGAATTCATGTTGGAATGTCATGGAGGTTAGGCCTGATAGCATAAGTTCTGCAACCATGATGGCAATTCCTGGCTTCTCCATACCAACAGTAAAATTACCGGCGGCACCTTATTCTTATTCAGGTTTGATGTCAAGCTTGGCTTGCCAAAAAGAAGAGTCTTTATTTGTTGGATCTGCATTTAGTGGCATCTCATTGTCTTCATCTTCAGTTAGCAACCGTACTTGTTCTGGCAATAGGTCCCCAACCTTGGGAAAACATTCTAGAGATGGGAGTACACTGGGGGAAGATGCAACAAAACAGAATCTTTGGGTGCCAAAGACGGTAAGAATTAATGATCCAGAAGAGGTTGCAAATAGTTCTATATGGTCAACTTTGGGAACAAAGTCTGAGAAGAACAAACTCGTTTTGAAAGGAAGTGTTTTTAAATCATTTGAACCTAAGTCAAATGCCAGTTCTCATAATTTAGATGATAATCAAATTCTAAGGGCAAACCCTGCTGCTTTCTCTCGCGCTGAATCTTTTCAGGAAAAAATTTATGATGTGGTCAACTCAACTGTGCCATATTGGCATTTGTTGTTGGATGAGGCACAGAAGATTTCTGAAAGTCCGTTTCTGTCGTGGATAGTTCCATGTATTGATGTTAAAGATGGTAGTCATGGCAAGAACCTTCAAGAAATTTTAATCTATATGTTCACTAACTTTTCAAGAGCTTTAGAAGGTGGAAAATTAGGGACTAGTGGGGCTCAGGGACAGATG 1758 0.4027 MSQVRDSAIKLFGADIHDIHFPIKSTTHFTDLHSLTQIQPLPQPIIVMVMPFNPSLCFLNSVLQMIGGACGANNGPKLQNGLEESTNDEVDVPLNEVSSKETDPQEDGNCNNIYKNPTPKLVAKVVHRTKEHRNGKRDIDHQEKVFKKPDKVLPCPRCNSSETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPIGAGKRKNKHSASQHCQIPVTPDAASEIQSDSKPASDMLLSSNGLSMTSRPVKVMENVTSLMEEAPLSESLETVLSLNGQTNIEVDSSTIKDDGEEPSSSSMRSNEIEQVGLTQHSNGLIPLHSFHYHPVPSWSYQWNSCWNVMEVRPDSISSATMMAIPGFSIPTVKLPAAPYSYSGLMSSLACQKEESLFVGSAFSGISLSSSSVSNRTCSGNRSPTLGKHSRDGSTLGEDATKQNLWVPKTVRINDPEEVANSSIWSTLGTKSEKNKLVLKGSVFKSFEPKSNASSHNLDDNQILRANPAAFSRAESFQEKIYDVVNSTVPYWHLLLDEAQKISESPFLSWIVPCIDVKDGSHGKNLQEILIYMFTNFSRALEGGKLGTSGAQGQM 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5048g00012 586 PANTHER CYCLIC DOF FACTOR 2 1 511 IPR045174 GO:0003700|GO:0006355
Mupr5048g00012 586 MobiDBLite consensus disorder prediction 405 421 - -
Mupr5048g00012 586 MobiDBLite consensus disorder prediction 405 428 - -
Mupr5048g00012 586 Pfam Dof domain, zinc finger 150 207 IPR003851 GO:0003677|GO:0006355
Mupr5048g00012 586 MobiDBLite consensus disorder prediction 281 302 - -
Mupr5048g00012 586 ProSitePatterns Zinc finger Dof-type signature. 155 191 IPR003851 GO:0003677|GO:0006355
Mupr5048g00012 586 ProSiteProfiles Zinc finger Dof-type profile. 153 207 IPR003851 GO:0003677|GO:0006355
Mupr5048g00012 586 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5048g00012 Mupr-Chr5048 45627 50716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5048g00012 142 510 C2C2-Dof Transcription Factor Family AT5G39660 38.243 6.90e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr5048g00012 zf-Dof 8.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5048g00012 - - gmx:102664782 675.241