Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5041g00005 ATGTCTCATCATCGTTCCTCCAATCCCTTCGCATCATCATCCACTCATTCCGATTCTGATTCCGACTCAGTGAGTTGCTTCGTCACCGATCTCTTCGAGACTCGCTCTCGCCTCTGTTCTTGCGAAGACACTAACATTAACCCCTTTTCCGGCGTCGTTTGCGATCTCCATCGTACGGAGCAAGTGTTAGGGTTAGGGTTAGGGTTTGGTGTTGAAATTGAGCCTCCAAACAACGGTAATAGTGCTGAGAGGGTTTTCAATTTTGCCGTGGGCGATGGTTCGCGCGGGCTTAGGGTTGTAGGGTTTGGTTCGGATTCGGATTCGAGTAGCGAGGAGGGTGGGGATAGGGTTGGTGGTGGGTTTGATGATTTCGATGTTCGATTGTGTTGGGATAGTCTCTGTTTGGAGGATCAGAGGACTCTGAATGAGGGTTTTGAATGGGAGGAGGTGGAGGAGAGGGTGAATGAGAGAGAGGATTTGGGTTTAGTTGTTGATGAGGTTGAAATTGATGGTGGTGATGATGATGGTAATTCGGTGGGGTCGGGGTTTACTAATGCTGTTGAGGAAGAAGAAGAGGATGCTGGGGAAGAGGCGCTTAGGTACCTCGAATGGGAGATTCTCTTGGCAGTTAACAATTCGGAGAGGAATGTTAGTAATTCCGGGTTGGAGCATGAGGGCAATGCTGGTGGTGCTGATTTGTTAACAATTCAGGATGGTTATGTGTACACTGCAGAGTATGATGCTTTATTTGGGCAGTTTCTCGAGAACGAGAGTGCCTTGAAGGGGAGCCCTCCGGCGGCTAAGAGTGTTGTGGAAAGTCTGCCTTTGGTGGAGTTGTCGAAGGAGGAGTTGCTGGGGAAGAATGTTGCATGTGCCATTTGCAAGGATGAGATTTTGGTGGAGGAGAAGGTGAGGAGGCTGCCTTGCTCACATTGTTATCATGGAGACTGCATTTTGCCATGGTTGAGCATTCGCAACACATGCCCTGTTTGTCGGTTTGAGCTGCCCACCGATGATCCAGATTATGAGCAGAGGAAGAGGCCATCAAAGTTACAAGAGCGGGCAAAATTGCAGAAAATCACAGCTGGAGCAGGCACTGTTGGAGTGGGCCATCTTGCCACCCACTATCCCACTATAGCATTTTTGGGGTCGGCCACTCTGCACTCGCAGCTATTTGGGATTAACCACTATGAACATGGTTATCAACCCTGGAAAGCAGCGTGGAGCAGCCAACTCCAAAACTGTTTTAGCGAGAGAACAGATAGTAGGATGACCACTATATAG 1284 0.4914 MSHHRSSNPFASSSTHSDSDSDSVSCFVTDLFETRSRLCSCEDTNINPFSGVVCDLHRTEQVLGLGLGFGVEIEPPNNGNSAERVFNFAVGDGSRGLRVVGFGSDSDSSSEEGGDRVGGGFDDFDVRLCWDSLCLEDQRTLNEGFEWEEVEERVNEREDLGLVVDEVEIDGGDDDGNSVGSGFTNAVEEEEEDAGEEALRYLEWEILLAVNNSERNVSNSGLEHEGNAGGADLLTIQDGYVYTAEYDALFGQFLENESALKGSPPAAKSVVESLPLVELSKEELLGKNVACAICKDEILVEEKVRRLPCSHCYHGDCILPWLSIRNTCPVCRFELPTDDPDYEQRKRPSKLQERAKLQKITAGAGTVGVGHLATHYPTIAFLGSATLHSQLFGINHYEHGYQPWKAAWSSQLQNCFSERTDSRMTTI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5041g00005 427 SUPERFAMILY RING/U-box 281 339 - -
Mupr5041g00005 427 FunFam E3 ubiquitin-protein ligase RING1-like 252 338 - -
Mupr5041g00005 427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 338 IPR013083 -
Mupr5041g00005 427 SMART ring_2 291 331 IPR001841 -
Mupr5041g00005 427 ProSiteProfiles Zinc finger RING-type profile. 291 332 IPR001841 -
Mupr5041g00005 427 MobiDBLite consensus disorder prediction 1 23 - -
Mupr5041g00005 427 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 191 336 - -
Mupr5041g00005 427 Pfam Ring finger domain 291 332 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5041g00005 Mupr-Chr5041 34234 36812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5041g00005 93 346 C3H Transcription Factor Family AT3G02340 40.000 2.01e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5041g00005 - - gmx:100812037 531.946