Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5040g00003 ATGGTGAAGGGACGCCAAGGAGAGCGTGTTAGGCTCTACGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAGTCAAACCAGTACCCAAACACATCCCTGATTCAAATCGAGGGAGTGAACACCAAAGAAGAGGTAGCATGGTATGCTGGCAAGCGAATGGCGTATATCTACAAGGCTAGTGTGAAGAAGAATGGAAGCCATTACCGCTGCATATGGGGCAAGGTTACAAGGCCTCACGGCAACAGTGGTATTGTTCGTGCAAAATTCAAGTCAAACCTTCCACCCAAATCAATGGGAGCACGGATTCAGACGTTCATGGGACAGAATGGTTTTCTCCGTTATCATGTTTTGGTTGTCTTAATATTTTGGCGGGTTTAA 381 0.4619 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKASVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARIQTFMGQNGFLRYHVLVVLIFWRV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5040g00003 126 Pfam Ribosomal protein L35Ae 12 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
Mupr5040g00003 126 SUPERFAMILY Translation proteins 12 104 IPR009000 -
Mupr5040g00003 126 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Mupr5040g00003 126 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Mupr5040g00003 126 FunFam 60S ribosomal protein L35a 7 111 - -
Mupr5040g00003 126 Gene3D translation elongation factor selb, chain A, domain 4 6 110 IPR038661 -
Mupr5040g00003 126 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 107 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5040g00003 Mupr-Chr5040 10320 13763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5040g00003 1 107 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.850 2.13e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5040g00003 K02917 - pop:7458094 215.698