Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr502g00004 ATGGACTGTTATTTGGATGGAAAAGCCCACAGAAAAAAGAAAGCAAAAGCAGCAGAAAGTGACAAAATCCCAGTAAAGCGTGACAGTGCCAGCTCCATTTGGCCTCTGAACCCAAAGTCTTGTGCTTTTCACATACCCATTTCCCCATTCGCCCCTTTCACCTCTGTTTTCTACCTTTCTCTTGGGTGGGGTTTCGCCAATCGCCATATACAAAAGAAGAAGAAGAAGAAGAGGATGTTTTCTAGGTTGATACATCCCCATGAAGGCCAGGAAGACATGCAGGGTGGTTCCAATCACGCTCACCTCGGAGACCCCTGTCTTGTCTTGACTTCTGATCCCAAACCTCGTCTTCGTTGGACCGCTGACCTTCACGAACGCTTTGTTGATGCCGTCACTCAACTTGGGGGTGCCAGTAAAGCCACTCCAAAAGCGATCATGAGGACCATGAACGTCAAGGGGTTGACGCTCTATCACTTAAAGAGTCATCTTCAGAAGTACAGGTTAGGTAAGCAATCAGGAAAAGATTCCGAAGAGGGATGCAAAGATGCTTCATATCTTCAAGAAAGCCCTGGTACCGATAACTCATCTCCAAAGTTACCAGCTTCTGATGCAAACGAGGGTCATGAAGTCAAGGAAGCATTACGAGCACAAATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAGGATGCAGAGCGGAGATATATGGGCATGCTTGAGCGAGCATGTAAGATGTTGGCCGATCAATTCATTGGGGACATAATTATCGACACAGACAGCCAAAAATTTCAAGGGCTGGAAAGCAAACCATCCAGAAGTTCCCTAGTTGATCAGGATGGGTTTTTTTCCCCTTGTACTGAGGTAGGTGGAATGCATGTTTCAGAAGTACCAGCTATTCTCCAGCCTCAAGGGGCTGATTGCTCCACTGAAAGTTGCCTAACATCACTTGAGAGTCTGGGAGGGTTGACGCTGGAAGGATCTCCGGGCGGATCGAAGAAGAGGATGCTGAGCTTGGACTCAATGGTAGCACCTTTGATCTGGAGTGAAGCCAACACCAGAACTCAAGGAATTCATTTAGCTCAAGTCAATCCTCCAGGAATAACTAGGTATGGCATGTAG 1146 0.4695 MDCYLDGKAHRKKKAKAAESDKIPVKRDSASSIWPLNPKSCAFHIPISPFAPFTSVFYLSLGWGFANRHIQKKKKKKRMFSRLIHPHEGQEDMQGGSNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSEEGCKDASYLQESPGTDNSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLADQFIGDIIIDTDSQKFQGLESKPSRSSLVDQDGFFSPCTEVGGMHVSEVPAILQPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLIWSEANTRTQGIHLAQVNPPGITRYGM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr502g00004 381 MobiDBLite consensus disorder prediction 168 182 - -
Mupr502g00004 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 171 IPR017930 -
Mupr502g00004 381 FunFam Myb family transcription factor 113 171 - -
Mupr502g00004 381 SUPERFAMILY Homeodomain-like 114 170 IPR009057 -
Mupr502g00004 381 Pfam Myb-like DNA-binding domain 117 167 IPR001005 -
Mupr502g00004 381 MobiDBLite consensus disorder prediction 187 201 - -
Mupr502g00004 381 Pfam MYB-CC type transfactor, LHEQLE motif 209 254 IPR025756 -
Mupr502g00004 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 87 327 IPR044848 GO:0003700
Mupr502g00004 381 NCBIfam myb-like DNA-binding domain, SHAQKYF class 114 169 IPR006447 GO:0003677
Mupr502g00004 381 Gene3D - 113 171 - -
Mupr502g00004 381 MobiDBLite consensus disorder prediction 168 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr502g00004 Mupr-Chr502 30045 32963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr502g00004 95 325 G2-like Transcription Factor Family AT3G24120 48.178 2.82e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr502g00004 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr502g00004 - - gsj:114401232 581.637