Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5028g00001 ATGTCCATAAACCACTACTCCATGGACCTTCCAGAAACGGCACTGTGGTGGCCTCACCAACATCAACAGCAACACATCTTAATGGAACAAAGCCCAAACCCCTCAAATTCCTGGCCCCCTTCAGACCCACTCCGTCTCAATCTCAACAACCAAAACGACGACGAAGAGGAGGACGAGGAGAACCAAACGACAACAACAACAACGGCTCAGAAAGAAACCCAAGACGAGAAGGAAGCCATGTTCGAGAAGCCGCTAACGCCGAGTGACGTGGGGAAGCTGAACCGACTCGTAATCCCGAAGCAGCACGCGGAGAAGTACTTCCCCCTTAGCGGCGGCGACTCGGCTGAGTGCAAGGGGTTGCTACTGAGTTTCGAGGACGAGTCCGGCAAGTGCTGGCGCTTCCGATACTCCTACTGGAATAGCAGCCAGAGCTACGTCCTCACCAAGGGCTGGAGCCGCTACGTCAAGGACAAGCGCCTCGACGCCGGCGACGTCGTTCTCTTCGAGCGCCACCGCTCCGACGCGCACCGCCTCTTCATCGGCTGGAGGCGCCGCCGACACACCGACGCTGCGCCGCCGCACGCTGCTAGGCCGGTGCCGCCCGTGAATAGTAAGAATGAACTTGCTGCCAGTGTGGGCGTGGGCTGGACCAAAGGCTTCTATTCTGCGCATCCTTATCCTACGCATCACCCCTTGCCACACCTACATCACTCTCTTCATGCAGGGAAAGGGTCCCAAGGTCAGAAGCAAAGGACGAGAGCAGTGGAAAACAGTTCCAGTTCGAGTTCGAGGGTACTTAGGCTGTTCGGGGTCAACATGGAATGCCAACCCGAACATGATTCTGGACCCTCCACACCCCAGTGCTCCTATAATAGCAACAACATGCCATCCACACAGGGCACAGATACCCACCATTTCTACCATCATCATCAACAACATCAACCTCCTTCTAATCCTCCCCCTCACATGGTACGTCACCAACCATACTACTACTACTAG 999 0.5576 MSINHYSMDLPETALWWPHQHQQQHILMEQSPNPSNSWPPSDPLRLNLNNQNDDEEEDEENQTTTTTTAQKETQDEKEAMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGDSAECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRSDAHRLFIGWRRRRHTDAAPPHAARPVPPVNSKNELAASVGVGWTKGFYSAHPYPTHHPLPHLHHSLHAGKGSQGQKQRTRAVENSSSSSSRVLRLFGVNMECQPEHDSGPSTPQCSYNSNNMPSTQGTDTHHFYHHHQQHQPPSNPPPHMVRHQPYYYY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5028g00001 332 MobiDBLite consensus disorder prediction 30 86 - -
Mupr5028g00001 332 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 33 290 IPR044800 GO:0003700
Mupr5028g00001 332 ProSiteProfiles B3 DNA-binding domain profile. 81 186 IPR003340 GO:0003677
Mupr5028g00001 332 FunFam B3 domain-containing protein 74 195 - -
Mupr5028g00001 332 CDD B3_DNA 80 176 IPR003340 GO:0003677
Mupr5028g00001 332 MobiDBLite consensus disorder prediction 278 302 - -
Mupr5028g00001 332 MobiDBLite consensus disorder prediction 275 332 - -
Mupr5028g00001 332 MobiDBLite consensus disorder prediction 243 263 - -
Mupr5028g00001 332 SUPERFAMILY DNA-binding pseudobarrel domain 77 186 IPR015300 -
Mupr5028g00001 332 MobiDBLite consensus disorder prediction 30 48 - -
Mupr5028g00001 332 Gene3D - 68 195 IPR015300 -
Mupr5028g00001 332 SMART B3_2 81 186 IPR003340 GO:0003677
Mupr5028g00001 332 Pfam B3 DNA binding domain 81 185 IPR003340 GO:0003677
Mupr5028g00001 332 MobiDBLite consensus disorder prediction 227 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5028g00001 Mupr-Chr5028 6422 8284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5028g00001 1 282 RAV Transcription Factor Family AT5G06250 43.448 8.82e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr5028g00001 B3 2.5e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5028g00001 K09287 - gmx:100818164 392.119