Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5001g00004 ATGACTAGTAATGACCAAACTTCTGCTGCTAGTCTCTACATTAGGAGTTTAATTTGCAACGCTGTTGCTGGTGCCTCTGCTGGGACAATAGCGGCTACATTTGTGTGCCCATTGGATGTTATTAAGACTAGGCTACAAGTTCATGGCCTTCCTCGTGGCCAGAAAGGTAGTGTCATTGTCACAAGCTTGCAAAATATAGTAAGGAATGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCGCAAGTTACGAGCAACTAAAGGGCCTGCTTCGTTCACACAATGGTTGCAACGAACTCACAACTATTGGAAATATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCAATTTCTACAAATCCATTATGGGTTGTTAAGACAAGACTTCAAACACAAGGAATGAGGCCTGATGTTATTCCTTACAAGGGTGTTCTTTCTGCTTTAAGAAGGATTACACACGAGGAAGGCATACGAGGCCTATATAGTGGCATTATTCCTTCGTTGGCTGGCGTAAGTCATGTTGCAATTCAATTTCCAGCATATGAAAAGATCAAGTCATACATAGCAGAAAAAGAGAACACAACTGTTGACAAGTTAGCTCCTGGGAGTGTTGCCATTGCATCGTCAATTTCAAAAGTATTTGCCTCTATAATGACTTATCCACATGAGGTAATACGATCCCGGCTGCAAGAGCAAGGCCAGGCCAAAAATGTTAAGGTTCAATATGCAGGGGTTGTTGACTGTACCAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGCTTTTATCGCGGTTGCGCCACCAATCTATTAAGAACAACTCCATCTGCTGTTATTACATTCACTAGTTATGAGATGATACACAGATTTTTGGAGCGAGCTACCCTTCAGGACAAGGGGTATCCTCAAGGCCATTCTAAATCCAATGAACTTAACAAGCCTCAGCCAGAAGCCAGTGACACTGATAGGGGGCAACCACCATCTCAGTCTAACATGAAAGCTTCATCAATTCCTCTTGGAAACAAAGACCAGCTAACAAGACATTGA 1086 0.4346 MTSNDQTSAASLYIRSLICNAVAGASAGTIAATFVCPLDVIKTRLQVHGLPRGQKGSVIVTSLQNIVRNEGFRGMYRGLSPTILALLPNWAVYFASYEQLKGLLRSHNGCNELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVIPYKGVLSALRRITHEEGIRGLYSGIIPSLAGVSHVAIQFPAYEKIKSYIAEKENTTVDKLAPGSVAIASSISKVFASIMTYPHEVIRSRLQEQGQAKNVKVQYAGVVDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLERATLQDKGYPQGHSKSNELNKPQPEASDTDRGQPPSQSNMKASSIPLGNKDQLTRH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5001g00004 361 Gene3D Mitochondrial carrier domain 14 304 IPR023395 -
Mupr5001g00004 361 MobiDBLite consensus disorder prediction 312 361 - -
Mupr5001g00004 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Mupr5001g00004 361 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Mupr5001g00004 361 Pfam Mitochondrial carrier protein 18 107 IPR018108 -
Mupr5001g00004 361 Pfam Mitochondrial carrier protein 217 306 IPR018108 -
Mupr5001g00004 361 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Mupr5001g00004 361 SUPERFAMILY Mitochondrial carrier 17 299 IPR023395 -
Mupr5001g00004 361 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Mupr5001g00004 361 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Mupr5001g00004 361 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Mupr5001g00004 361 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Mupr5001g00004 361 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Mupr5001g00004 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Mupr5001g00004 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Mupr5001g00004 361 MobiDBLite consensus disorder prediction 314 361 - -
Mupr5001g00004 361 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 308 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5001g00004 Mupr-Chr5001 16771 21513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5001g00004 33 355 Chloroplast and Mitochondria Gene Families AT1G25380 63.964 3.31e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5001g00004 K15115 - gmx:100797064 632.098