Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4998g00003 ATGGAGGTTGGCTTGAAGAAGGAGAAGAAGATGGGGTTTGAGGAGACTGAGTTAAGGCTTGGATTGCCTGGAAACGCACCCGAAGAAGTGCTGAGGAAGAGAGGATTCTCTGAGACTGAAACTCATCATGACACTGCCACCGTGGATTTGATGCTTAATCTATCCTCTAAGGAACCAACTACTGTATCAGATCCAACTGATAAGCACAACACTTTGCCTAAGGAGAAGACCCTTCTGCCTGCAGATCCTGCTAAGCCTCCTGCCAAGGCGCAGGTGGTTGGTTGGCCACCTGTGAGGTCCTTCCGAAAGAACATGTTAGCTGTGCAAAAGAGCGTTGGAGAGGAGAACGAGAAGAATAGCAGCCCTAATGGTAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTACCTCCGCAAAGTGGACTTGAAGATGTATAAGAGTTACCGAGAGCTTTCTGATTCTTTAGGCAAAATGTTCAGCTCCTTCACTATTGGCAATTGTGAATCCCAAGGAATGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTCTTGAACAGCTCTGATTACGTCCCAACCTATGAGGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGCATCATGAAAGGAAAGGAGGCTATTGGTCTTGGTCTTGCACCAAGAGCCATGGCAAAATGCAAGAACAGGAGCTAG 735 0.4694 MEVGLKKEKKMGFEETELRLGLPGNAPEEVLRKRGFSETETHHDTATVDLMLNLSSKEPTTVSDPTDKHNTLPKEKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAVQKSVGEENEKNSSPNGSFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4998g00003 244 SUPERFAMILY CAD & PB1 domains 116 223 - -
Mupr4998g00003 244 MobiDBLite consensus disorder prediction 55 91 - -
Mupr4998g00003 244 Gene3D - 118 235 - -
Mupr4998g00003 244 Pfam AUX/IAA family 15 231 IPR033389 -
Mupr4998g00003 244 ProSiteProfiles PB1 domain profile. 124 224 IPR000270 GO:0005515
Mupr4998g00003 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 229 IPR003311 GO:0005634|GO:0006355
Mupr4998g00003 244 FunFam Auxin-responsive protein 119 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4998g00003 Mupr-Chr4998 23369 26278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4998g00003 111 227 B3 DNA Binding Superfamily AT3G61830 33.333 2.81e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr4998g00003 AUX_IAA 5.2e-83 CL0072