Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4992g00003 ATGATGCATCATCAGATTGAGATGGAGAACCCTGAGCTCTTCCAATTCCTCACAAACAGCAACGATTCTTTTTTCAACTCTGCATCGTACGGTGTCCCTGCACCTACATCATCAACCATGCAGCATAGCTTCTCTGGTTCCTTTCCTTATTACCCTCTGGAAGCATCCGATGTACCATATCATGAAGATAAAGCCCTCGCTGCTTTGAGAAACCACAAGGAGGCTGAGAAGAGAAGAAGGGAAAGAATCAACTCCCACCTCGATAAGCTTCGCACTCTTCTTCCTTGTAATTCCAAGACGGACAAGGCTTCACTTCTCGCCAAGGTGGTCCAAAGGGTGAAAGAGCTGAAGCAGCAAATATCCGAAATAACCGAAGCCGAAACGTTTCCTTCGGAGGCCGATGAGATCTCTGTTCTGTCCACCAGTGGGGATGAAAGCGGCGGCGACGGACGACTCATATTCAAGGCCTCTCTGTGCTGTGAGGACCGCTCTGACCTCATCCCGGACCTCATCGAAATCCTCAGGTCTTTGCACCTCAAAACGCTCAAAGCCGAAATGGCAACACTCGGAGGAAGAACCCGCAACGTGCTCGTCGTGGCCACGGATAAAGACCACAGCGTTGAATCAATTCAGTTCCTGCACAACTCGTTGAAGTCTCTGCTAGAACGCTCCAATTCTAACGACAGATCCAAAAGACGCCGTGCCTTAGACCGAAAGTTCATGCCTTAA 729 0.4952 MMHHQIEMENPELFQFLTNSNDSFFNSASYGVPAPTSSTMQHSFSGSFPYYPLEASDVPYHEDKALAALRNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVKELKQQISEITEAETFPSEADEISVLSTSGDESGGDGRLIFKASLCCEDRSDLIPDLIEILRSLHLKTLKAEMATLGGRTRNVLVVATDKDHSVESIQFLHNSLKSLLERSNSNDRSKRRRALDRKFMP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4992g00003 242 SMART finulus 73 122 IPR011598 GO:0046983
Mupr4992g00003 242 PANTHER TRANSCRIPTION FACTOR BHLH30 41 237 IPR045847 GO:0003700|GO:0006355
Mupr4992g00003 242 Gene3D - 62 128 IPR036638 GO:0046983
Mupr4992g00003 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Mupr4992g00003 242 Coils Coil 106 126 - -
Mupr4992g00003 242 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Mupr4992g00003 242 CDD bHLH_AtAIG1_like 62 138 - -
Mupr4992g00003 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 125 IPR036638 GO:0046983
Mupr4992g00003 242 FunFam transcription factor bHLH30 62 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4992g00003 Mupr-Chr4992 8494 10290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4992g00003 5 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 60.000 2.04e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr4992g00003 HLH 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4992g00003 - - gmx:100790009 389.808