Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4985g00002 ATGTCCATCTTGCCCTCACAATCCCAAGCGGCATCTTCATCCTCTTCGTCTGCGCCATCTCCCAACCCTAATCCCCAACATGGAATTGCAAATCCTCTTCCTCAACCCTTCTCTTCTCTTTCCCCCACTCTCGACCTCTCTTTTGGATCTTTCCATATCTCCGGCAACCCAGGTTCATCGGCTCCAGTTGCTCGAGATTCTGCTGGATCTTCCGAAAAGGTGACCGAATTAGGGTCTCCAAGTGGAGTGATGGTTTCACCTCAGCAGAACTCTAGAACACGTTCTGTGAGCCATGGGGCAAGACGGACAGGAACGGGATCGGGATCGGTTTATCATAGAAATCAACAGATTCCTGGGTCTGTGAATCCTCATGGAAGTGCCCCTTCGGCAGGGAGAAAAGCTCAGGCCATGAATGGGAATTACTTGCTGAATTTTCATTATGACCCGATATCCCGTTCTCAACCACGAGGTCCTCCTCCTCCCCCTACAGCAAGAAGGAATCGGAAGAGGAAACCGTACAACAAAGATTTGTTTTTGCAGGCGAATTTCAAGTTCATGGTGTTAGATTCAGGAAATTATTCGTCTGAGTCAATGGATCCAGACAAAATGTTGCAGTGGGAAGATATTATATGTGTGACATATTTGACCCCCTTTTCAGTTCAGTGTCCAATTTGTTTGGAGTATCCCCTCTGTCCACAGATGACCTCGTGTGGACATATTTTCTGTTTCCCATGTATTCTACAGTACTTATTCATGGGTGAAGAGGATCACAAAGGTGATAGCTGGAAAAGATGTCCTTTGTGCTTTGTGATGATATCTGCCAAGGATTTATATACGGTCCACATCACAAATGTCAAACAGTATCGAGTAGGAGATGATGTTGAGTTCACCTTTTTAACACGGAAAAAGGATTCGTTTACTCTGTCACATAAAAATAAACAAGAGGCAAATATCACATCACACGGCAATGGTGTTTCCTGTGATCCCTTTTCTAAGTTCACTCTTACATCAGATGTAGATCTCTCAGTGAGACATGCAATATCCGATCTAGATGGTTGGCTGGCCAGAGCTGATTCGGGTCTTGTTGATGACCTGGAGAAGCTTCCTTATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAGGTATTGGAATGAACACAGATCTTGTGACAATGAAAAATCTTCTAAGCTTATTGATTATGGACATCAGATACCATTAGCAGGTTCAAATTCTATGGATACTGATGATGAAAACTGTTCTAATGGATCAAGAGCTTCCTCTACTGATTTACATGACCAAAATAAGATTATGATGTTGGATAAGTCAACTGCTGGAGCCTCTTTGGATCAAAACTTGGATGTGGAGAAAGAATTAATAGAGCAGGATATGAATTTATCTTCATATAAAGAGAAAAGTGATATTCAAAGGCATTCCGATGGTGTTGTTGGAGATGTGAAGGAAAATGATTCATACAGTTTTTACCAGGCTGCTGATGGTCAGCATTTAATTCTTCATCCTCTGAACATGAAGTGTTTGCTTCACCATTATGGGAGCTATGATATGCTTCCACACAGAATAAGTGGAAAGATTCTGCAATTGGAGACAGTTACTCAGTCTGAGGCCATGAGGAGGCGGTATCGATTCCTTGGTCATTTTCCATTAACCACAACATTTCAGCTTTGTGAAGTTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATTGATGAAATCAAGAAGCGCACAAATCAGAGGAAGCAGCTTGCAAAAAAGGAACTGAAGGAAAAAATAAAGGCTGAAGCTACTGCTACTTATTCTCTTCCCATATCATTAAGTTGTCAGTTTACTTCTCACGACAATCCTCCAACATTCTCCATGGATGACTTTGAAGCTCTAGGAAATTCAACCATATCCTCAAGTCCTCCAGTAGCTGGGGAGAGAAAATCGTTCTCAAATGTTACTAGGCTTGGGTTTGCTGCTGCTCATGATTCTCCATCCTTACAAATTCAAGAAACTAGTGGTAACAACAATATGACCAGTGATTCTTCTGTCGCAGCAGGTTTGAGAAACGGGGAGACACAATCATACTCCAATGTCATATCAAGAGCAGAATCTAATATTAGCTCAAATGCTGCACCAAAGGCAAATGAGTTAGGGAAGAAAGGAAAGAAACCAAATCGTGTTCTTCTGTCAACAGCTGGTGGTAGGCGTTATTGA 2232 0.4229 MSILPSQSQAASSSSSSAPSPNPNPQHGIANPLPQPFSSLSPTLDLSFGSFHISGNPGSSAPVARDSAGSSEKVTELGSPSGVMVSPQQNSRTRSVSHGARRTGTGSGSVYHRNQQIPGSVNPHGSAPSAGRKAQAMNGNYLLNFHYDPISRSQPRGPPPPPTARRNRKRKPYNKDLFLQANFKFMVLDSGNYSSESMDPDKMLQWEDIICVTYLTPFSVQCPICLEYPLCPQMTSCGHIFCFPCILQYLFMGEEDHKGDSWKRCPLCFVMISAKDLYTVHITNVKQYRVGDDVEFTFLTRKKDSFTLSHKNKQEANITSHGNGVSCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLEQRKRYWNEHRSCDNEKSSKLIDYGHQIPLAGSNSMDTDDENCSNGSRASSTDLHDQNKIMMLDKSTAGASLDQNLDVEKELIEQDMNLSSYKEKSDIQRHSDGVVGDVKENDSYSFYQAADGQHLILHPLNMKCLLHHYGSYDMLPHRISGKILQLETVTQSEAMRRRYRFLGHFPLTTTFQLCEVDLSEMLPPEALAPFIDEIKKRTNQRKQLAKKELKEKIKAEATATYSLPISLSCQFTSHDNPPTFSMDDFEALGNSTISSSPPVAGERKSFSNVTRLGFAAAHDSPSLQIQETSGNNNMTSDSSVAAGLRNGETQSYSNVISRAESNISSNAAPKANELGKKGKKPNRVLLSTAGGRRY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4985g00002 743 MobiDBLite consensus disorder prediction 1 133 - -
Mupr4985g00002 743 CDD RING-HC_RNF10 220 277 - -
Mupr4985g00002 743 MobiDBLite consensus disorder prediction 411 432 - -
Mupr4985g00002 743 Coils Coil 584 604 - -
Mupr4985g00002 743 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Mupr4985g00002 743 MobiDBLite consensus disorder prediction 148 171 - -
Mupr4985g00002 743 SUPERFAMILY RING/U-box 221 275 - -
Mupr4985g00002 743 ProSiteProfiles Zinc finger RING-type profile. 222 268 IPR001841 -
Mupr4985g00002 743 PANTHER RING FINGER 10 FAMILY MEMBER 58 743 IPR039739 -
Mupr4985g00002 743 MobiDBLite consensus disorder prediction 1 24 - -
Mupr4985g00002 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 297 IPR013083 -
Mupr4985g00002 743 FunFam RING finger protein 10 215 283 - -
Mupr4985g00002 743 SMART ring_2 222 268 IPR001841 -
Mupr4985g00002 743 Pfam Zinc finger, C3HC4 type (RING finger) 222 268 IPR018957 GO:0046872
Mupr4985g00002 743 MobiDBLite consensus disorder prediction 712 743 - -
Mupr4985g00002 743 MobiDBLite consensus disorder prediction 31 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4985g00002 130 678 C3H Transcription Factor Family AT3G26730 56.460 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4985g00002 K26979 - gmx:100798764 1218.37