Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4984g00002 ATGGAAGCGGAAACTGGACGGAAAGTGGAAGAGATGGTGTTAGACATACTGAAGAAATCGAACATAGAAGAAGCCACTGAGTTCAACATCCGAGTGGCTGCCTCGGAGCGTCTTGGCATCGACCTTTCCGACCCGAGGAGTAAACAGTTCGTGAGAAGCGTCGTTGAGTCTTATCTTCTCTCCGTTGTGGCCACCGAAAAGTCCAGAGACAGAGACACTGAGATAAAGGAAGATATTGTTGCTGCCAACGAAGAGTTCAGAGAGACAGAGGCGCCGAAACCGAAGAGAGAAGATTGCGAACGCGTTATTTGCCAGCTGTCCAACAGGAGGAACGTGGCCGTTAAACCATTCAAAGGAACAACACTGGTCTCAATTAGGGAGTTCTATGTTAAAGATGGAAAACTACTTCCTGGTTGTAAAGTTAAGGTGATTTGGACATGTGCAAAGAAGATCGTTGAAGGCATGGGTGAGGAGGGTAAATTGCATAGGAAGGCCAAGAATGACATTAGAAAATTTTATTTAAAAGGATCTTATGGGATAAGTTTATCTTCTGAACAATGGTCAACCTTCAAGAAGAGTGTTCCTGCCATAGAGGAAGCTATCACAAAGATGGAAGGAAGGCTAAGATTGGAGCTTAATGATAAGAAAAATGGAGATGCATCAAATTCAGTTGTTGATGTTGCTCCTGTTGAGCCTGTCCCTACTGAGGTCATCCGTTTTGAGGTCCCCATCGAGGTCATTCGTTTTAATGGGAAGAATTATCAATTCTGGGCTCAGCAGATGGAATTACTCTTGAAACAATTAAAAATTGAATACGTGCTGACTGAACTATGTCCGAACTCTACACTAGGACAAGCTGCAAGTGCTGAAGAAATTGCTGCAGCCAAAGCTGCAGAAAGGAGATGGCTGAATGATGATTTAATGTGTTGTCGCAATATATTGAGCCATTTATCTGATCATCTTTTCAACCAGTATGCAAACAGAAAAATGAGTGCAAAGGAGTTATGGGAAGAGGTAAAATTGGTTTATCTATACGAGGAATTCGGAACTAAGAGATCTAAAGTGAAAAAGTATATTGAATTTGAGATGGTGGATGAGAAAGCAGTTGTTGAACAAATCCGAGAATTGAATAACATTGCAGATTCTATTGCCGCAGCTGGAATATCTATTGATGATAACTTTCATGTTAGTGTCATCATTTCAAAGCTTCCACCATCCTGGAAGGACTTCTGCATCAAGTTAATGCGTGAGGAATATCTACCTTTCTGGAAATTAATGGAACACATAAAAATAGAGGAAGAATCTCGCAATGGAGTAAGACCATTGGGTGAACATTCTAACAATATAGGATTTCACCAGGCCAATAAAGGTGGACTGAGGAGGGCTGATTATAAGCCACTGGCAATGTGTAGGAATAGGTCAGAAATTAATACCAAGATCATGTCCTGTAGTATATGTGGCAAGAAGGGACATCTTTCTAAAAATTGCTGGCGAAGATATGACAAGCAAGCTAATGAAAGGAAAGCAGAAGAGGATGTGCGTAGACCTACCGAAGTGGATACTCCAGGTGCTACCCAGTAG 1581 0.4168 MEAETGRKVEEMVLDILKKSNIEEATEFNIRVAASERLGIDLSDPRSKQFVRSVVESYLLSVVATEKSRDRDTEIKEDIVAANEEFRETEAPKPKREDCERVICQLSNRRNVAVKPFKGTTLVSIREFYVKDGKLLPGCKVKVIWTCAKKIVEGMGEEGKLHRKAKNDIRKFYLKGSYGISLSSEQWSTFKKSVPAIEEAITKMEGRLRLELNDKKNGDASNSVVDVAPVEPVPTEVIRFEVPIEVIRFNGKNYQFWAQQMELLLKQLKIEYVLTELCPNSTLGQAASAEEIAAAKAAERRWLNDDLMCCRNILSHLSDHLFNQYANRKMSAKELWEEVKLVYLYEEFGTKRSKVKKYIEFEMVDEKAVVEQIRELNNIADSIAAAGISIDDNFHVSVIISKLPPSWKDFCIKLMREEYLPFWKLMEHIKIEEESRNGVRPLGEHSNNIGFHQANKGGLRRADYKPLAMCRNRSEINTKIMSCSICGKKGHLSKNCWRRYDKQANERKAEEDVRRPTEVDTPGATQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4984g00002 526 Gene3D Transcriptional Coactivator Pc4; Chain A 95 144 IPR009044 GO:0003677|GO:0006355
Mupr4984g00002 526 MobiDBLite consensus disorder prediction 504 518 - -
Mupr4984g00002 526 Pfam Transcriptional Coactivator p15 (PC4) 104 140 IPR003173 GO:0003677|GO:0006355
Mupr4984g00002 526 Gene3D Transcriptional Coactivator Pc4; Chain A 160 204 IPR009044 GO:0003677|GO:0006355
Mupr4984g00002 526 SUPERFAMILY ssDNA-binding transcriptional regulator domain 103 139 IPR009044 GO:0003677|GO:0006355
Mupr4984g00002 526 ProSiteProfiles Zinc finger CCHC-type profile. 483 496 IPR001878 GO:0003676|GO:0008270
Mupr4984g00002 526 Pfam gag-polypeptide of LTR copia-type 302 437 - -
Mupr4984g00002 526 MobiDBLite consensus disorder prediction 504 526 - -
Mupr4984g00002 526 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 206 IPR045125 GO:0003713|GO:0060261
Mupr4984g00002 526 Pfam DEK C terminal domain 7 59 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4984g00002 Mupr-Chr4984 11106 13924 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Mupr4984g00002 Retrotran_gag_2 3.8e-15 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4984g00002 - - gmx:100800963 647.891