Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4968g00008 ATGTCGCAGCGCTCGACGCCAGCACCGTTTTTGACGAAGACATATCAGTTGGTGGACGACCCTGTCACCGACGACGTGATTTCGTGGAGCGAAAGCGGCAATACTTTTGTCGTTTGGAAACACGCGGATTTCGCTAAGGATTTGCTTCCCAATATCTTCCACAACGAATATTCTGTTTTGTGGCATGCGGTTCACGGAAACAGGGGATTCCGAAAGATCGTTCCCGACAAATGGGAATTCGCCAACGAGTATTTCAAGCGAGGACAGAAGGAGGTCCTCGTCGAGATCAAGCGGCGGAAGACGGTAACCCAATCGCCGGCAGCCGGAAAATCCGCGGGCGGAGGCGGGGGCAACACCTCGGCGTCTCACTCCGGCGGCGACGACATGGGGTCGACGTCGACGGAGTCAGTGGAGGCGGCGGCGGCGACGACTCAGTGCGCGGATTTATCGGGCGAGAACGAGAAACTGAAAAAGGACAACGAGAAACTGAGCAGCGAGTTGGCACGTGCGAAGAAACAGTGCGACGAACTGGTAGCTTTTCTGAGGGAGTCTCTGAACGTGTGTCCCGATGTGATCAACCGCATCATTCAGCAAGGAACGTGTGGGTCCAGCGACGATGCGGTGCGTTTTGGCGCTAATGATAATGACGACGAAAATGCGGTAGGTGAATGTGAAGCCAAAGGTGGAGAAAGTTTGAAACTGTTTGGTGTTTGGTTGAAGGGGCAGGATGGGAAGATGGACAAAGAGAAATTGAAGATTGGTAATTGCCGCAAGAGAGGCCGCGAAGACCCAATTGCTGCCACTGCCAACGAATTCAAGACCCTTGCTTAA 831 0.5367 MSQRSTPAPFLTKTYQLVDDPVTDDVISWSESGNTFVVWKHADFAKDLLPNIFHNEYSVLWHAVHGNRGFRKIVPDKWEFANEYFKRGQKEVLVEIKRRKTVTQSPAAGKSAGGGGGNTSASHSGGDDMGSTSTESVEAAAATTQCADLSGENEKLKKDNEKLSSELARAKKQCDELVAFLRESLNVCPDVINRIIQQGTCGSSDDAVRFGANDNDDENAVGECEAKGGESLKLFGVWLKGQDGKMDKEKLKIGNCRKRGREDPIAATANEFKTLA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4968g00008 276 SUPERFAMILY "Winged helix" DNA-binding domain 6 99 IPR036390 -
Mupr4968g00008 276 Coils Coil 139 180 - -
Mupr4968g00008 276 MobiDBLite consensus disorder prediction 103 144 - -
Mupr4968g00008 276 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr4968g00008 276 MobiDBLite consensus disorder prediction 115 144 - -
Mupr4968g00008 276 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 200 IPR027725 -
Mupr4968g00008 276 Gene3D - 2 101 IPR036388 -
Mupr4968g00008 276 FunFam Heat stress transcription factor B-4 2 100 - -
Mupr4968g00008 276 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4968g00008 Mupr-Chr4968 52962 55994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4968g00008 2 250 HSF AT4G36990 51.154 9.75e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr4968g00008 HSF_DNA-bind 3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4968g00008 K09419 - gmx:100801897 361.303