Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4962g00001 ATGCGAAAACCCGCTCCGCTTCGCCGCTATCATGGCCGCAACAGCCGCGACATTGAACTGCGCTGTTACGAACGTTCTGTGGCACGCCACTGTTGCTCTGCCGCTATAGCGGCCGCTATTAACCACTATGAAAGAACCAAACTACCAACTTTGTTCTCATTGCTGATAGAATTGCTAATGAAAATACCCAATATAATGTTTTTACACAGCTCTTTGTTTATTCTAATGTCTATCTGTAGTAATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGAGAGGATGCTTTCAAGCCTGAAATATATGGTGATGTTATCATTGTAGAGCGCAGGATATCTGAATCCACAAGTTCTACTACATTAAGAGATCACCAAGGAAGAAAAGTTGTCAGTCGGAAAGCAGATCTTCTGGAAATCGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATCATGAGTCAAGACAAAAGCAGAGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACGCTTCTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCCAATGAAATAATTGCCGCACACGGAATAGTTGAAGAATTAGAGACTGCAATAAGGCCCATAGAGAAGGAGCTTAACGAGCTGCAAGTTAAAATTAGAAATATGGAACATGTAGAACAAATATCCATACAGGTTCAGCAGTTAAAGAAGAAACTTGCATGGTCATGGGTTTATGATGTGGACAAGCAACTAGAGGAACAAAGTATAAAGATTGAGAAGTTGAAGAACCGGATACCTACCTGCCAGGCGAAGATTGATCAACAACTGCATTGGGTTGAAAAGTTGAAGGAAAGCTGCTCCAAGAAGAAACATGAAATATCAAGTATGTTGGAAAAGACATCACAAGTTAAGCAAATGAAGGAAAATTTAAACCAATCTGTGTCCATGGCAAAGAAAGAGGCATTCGAACTTGAGCGAGACTGCAAATGCAAAACTAGCAACATACAAAAGCTGGTCCGGCAACTTAAAATGCTTGAACAACAAGTACAGGATACTCGTCAGCAGCATGTAAAAAATACTCAGGCTGAAGAATCTGACATGGAGGAGAAACTGAAGGGGCTTAAAGATGAGGTTCATGCTGCTGAGTTAGAGCTGAAGAGATTGAAAGAAGAAGATGCTTTGTTAATGGATAGCATACGTAGGCAAAATGATGAAATCCGAAAGATAGCTGATGAGATCCGTGATCATGAAAAAAATCACCGTGCTATCACGAGTCGAATCTGTGATTTTCAACAACATCAAAGCAATATGATTACTGTTTTTGGAGGACCGAAAGTGATAAATTTATTACGTATAATCGAGAGAAACCACCAAAAGTTTAAGATGCCTCCAATTGGTCCAATTGGTGCTCATCTGAAGCTTCTTCATGGTAAAAAATGGGCTGTTGCCCTCGAATATGCTATTGGGAAATTGCTCAATTCTTTTATAGTGACTGATCATGCGGACTTTCGTGTTCTGAAACAATGTGCGAAGGAAGCAAACTATGGTTACCTTCAAATTATTATTTATGATTTTTCAACCCCAAGGTTGACAATACCACAGCACATGCTTCCTCATACAGAACATCCGTCAATTCTTTCTGTCTTACAATGCGAGAATCACACTGTGGTTAATGTCTTGGTGGATCTGGGAAATGTTGAGAGACAAGTGCTTGTTAATGATTATGAAGCTGGGAAAGTGGTTGCCTTTGAACGAAGGATCCGAAATTTGAAGGAAGTCTATACGGAAAATGGATGTAGAATTTTTTCTCGAGGTTCAGTGCAGACTGTTCTTCCTCCAAATAAGAGGCAAAGAACTGGCCGTCTTTGTGGTTCTTTTGAAGATGAGATTGAGAAACTTCATGCTGAAGCATCTGATGAACAAAAGGCTGCTACTGACTGTAAAAGGGTTAAAAGAGAGGCAGAGATCAAGCTTGAGGAGCTTGACAAGAATATGAATTCTATAAAGAGGCTTCGTGTAAATGCAGATAAAAGTTTTACTTCTAAGAAGCTAGCATTGGAGGAGGCAATGCATTTGCATACTGCTGAAAATAGTGCAACACCTTTGTCCTCTGTTGATGAGCTCATTGAAGAAATTTCAGAAATCCAGAAAAAAATAGATGAAGAGCAAGTCTTGTTGGAAGGCCTTCAGCAAAAGGGGCGCGAAGCAGCAGGAAAAGCAGATGATCTTAAAGTAAAATTTGACAAACTGTGTGGATCAGCAAACGGTGAAATTGCTGCCCTAGAGAAAGCTGAGAGTGAACTTGTGGAAATTGAAAAAGAAATGGTTTCCGCAAAAAAGGCAAAGGATCATTATGAGGGTGTCATGAATAACAAGGTTGTACTTGATATTAAGGAGGCAGAGGAACACTTTCTGGAGCTTACAAAGAGGCGCAAGGAAAGTGTTGAAAAGGCTTCCATAATTTGCTCTCAGAATGAACTTGATTCGTTAGGAGGTTGTGATGGGAATACTCCAGAGCAAGTCAGTGCTCAATTAGAACGACTAAATCAAACACTTAGGCGTGAGAGCCAAAGGCATGACATTATAATATTGGTTCACGCTGTCATCTTGCTACGCCTGCCAGAGAGCCTTAGAGTTACGGAAGAGAAAGTTTCAGAGAAATGCTACTTATTTGAAGCACCAGCTTTCTTGGAAGTACAAATGCCCCAAGATGCATCAAACAGAGCAGTTCGAGACACTAGGGGGCTTTCAGGGATGACAATGAGTAATGGACCCAACGAGTACTTGCAAAAGTTACCCATAAAGTTAGTAAAAGAGTGGGTTACGGACACAGTCAATAGCGGCCGGAGCGGCGGCAACATACAACAGCTGACACATAGCAGTGCGGTTCTCAATCGCAGCAGTGCGGAGCGAGCGCGATCTAGGAAATCGCAGCTGTCGTGG 2952 0.4082 MRKPAPLRRYHGRNSRDIELRCYERSVARHCCSAAIAAAINHYERTKLPTLFSLLIELLMKIPNIMFLHSSLFILMSICSNAVIQVEIQNEGEDAFKPEIYGDVIIVERRISESTSSTTLRDHQGRKVVSRKADLLEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISNEIIAAHGIVEELETAIRPIEKELNELQVKIRNMEHVEQISIQVQQLKKKLAWSWVYDVDKQLEEQSIKIEKLKNRIPTCQAKIDQQLHWVEKLKESCSKKKHEISSMLEKTSQVKQMKENLNQSVSMAKKEAFELERDCKCKTSNIQKLVRQLKMLEQQVQDTRQQHVKNTQAEESDMEEKLKGLKDEVHAAELELKRLKEEDALLMDSIRRQNDEIRKIADEIRDHEKNHRAITSRICDFQQHQSNMITVFGGPKVINLLRIIERNHQKFKMPPIGPIGAHLKLLHGKKWAVALEYAIGKLLNSFIVTDHADFRVLKQCAKEANYGYLQIIIYDFSTPRLTIPQHMLPHTEHPSILSVLQCENHTVVNVLVDLGNVERQVLVNDYEAGKVVAFERRIRNLKEVYTENGCRIFSRGSVQTVLPPNKRQRTGRLCGSFEDEIEKLHAEASDEQKAATDCKRVKREAEIKLEELDKNMNSIKRLRVNADKSFTSKKLALEEAMHLHTAENSATPLSSVDELIEEISEIQKKIDEEQVLLEGLQQKGREAAGKADDLKVKFDKLCGSANGEIAALEKAESELVEIEKEMVSAKKAKDHYEGVMNNKVVLDIKEAEEHFLELTKRRKESVEKASIICSQNELDSLGGCDGNTPEQVSAQLERLNQTLRRESQRHDIIILVHAVILLRLPESLRVTEEKVSEKCYLFEAPAFLEVQMPQDASNRAVRDTRGLSGMTMSNGPNEYLQKLPIKLVKEWVTDTVNSGRSGGNIQQLTHSSAVLNRSSAERARSRKSQLSW 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4962g00001 984 Coils Coil 708 735 - -
Mupr4962g00001 984 Coils Coil 247 274 - -
Mupr4962g00001 984 SUPERFAMILY Smc hinge domain 408 608 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mupr4962g00001 984 Coils Coil 647 674 - -
Mupr4962g00001 984 MobiDBLite consensus disorder prediction 954 984 - -
Mupr4962g00001 984 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 79 863 - -
Mupr4962g00001 984 Coils Coil 800 820 - -
Mupr4962g00001 984 Coils Coil 360 422 - -
Mupr4962g00001 984 Gene3D - 73 266 IPR027417 -
Mupr4962g00001 984 Coils Coil 757 784 - -
Mupr4962g00001 984 Coils Coil 201 221 - -
Mupr4962g00001 984 Coils Coil 310 358 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4962g00001 79 921 Structural Maintenance of Chromosomes family AT5G07660 50.562 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4962g00001 K22804 - gmx:100816916 1269.99