Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4961g00008 ATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCATCTTCTGTGCAGGAGAAAGAGTATTCCTTAAGGCAGTTATCGGAGCTTATAGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGTTCATTGAATGTGAAGATACAGGCAGCAATTGTCTTGGGCTCCCTTTGTAAAGAAAATGAACTAAGGGTGAAGGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTGGTCTACTAAAGTCCAGTTCCACCGAAGGGCAAATTGCTTCTGCAAAGACTATTTATGCTGTCTCTCAAGGTGGTGTAAAAGATCATGTTGGTTCAAAAATTTTTTCAACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGAAAAGTGGACTGAAGACAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCCAGCAGTACCGAGGGATTCTGGAACGCAACAATTCGAGCTGGAGGAGTGGACATATTAGTGAAGTTACTGGCAACAGGACAGCCTAACACTTTAGCTAATGTATGCAATTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCGAAGGTGTTGACAGCAGAGGTGACAAAACAACTTCTGAAACTATTAGGCCCTGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAGGCAAGGCGAGAGATAGCCAATGCTAATGGTATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCCAAAGAATACATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGAGGTTTGTCTTATGTCATATCTAGCCTTGGTCAAAGTCTTGAATCATGCACCTCATCTACACAAATTGCTGACACACTAGGAGCTTTAGCATCAGCTCTCATGATATATGATGACAAGGCTGAATCTACCAGAGCATCAGATCCTTTGATAGTTGAGCAGACATTACTCAAACAATTTAGGCCTCGCTTGCCCTTCCTTGTACAGGAACGGACCATTGAAGCTCTTGCTAGTTTGTATGGAAATTCCATACTTTCAACCAAACTAGCAAATTCTGCTGCAAAGCATCTGCTTGTTGGTTTGATAACAATGGCTGCCAATGAAGTGCAAGACGAGCTTATAAAAGCTCTATTGACACTGTGCAAAAATGAAGGCAGTTTATGGCGTGCACTTCAGGGCCGAGAAGGAGTTCAGTTATTGATATCTCTTTTGGGGCTTTCATCAGAGCAGCAGCAAGAATGTGCAGTTGCCCTGCTTTGCCTTCTATCATATGAAAATGATGAAAGTAAATGGGCAATTACTGCTGCTGGTGGCATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCAGCAACAATCCTTAAAAACCTGTGCAATCATAGTGAAGATATACGTGCTTGCGTTGAAAGTGCCGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAACGGAAAGGATATTGCTGCAAAGACTTTAAATCACTTAATACATAAATCTGATACTACGACGATCAGTCAGCTTACAGCATTATTGACTAGTGATCTACCTGATTCTAAGGTTTATGTTTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGTGATATTTTACGTGAAGGTAGTGCTTCCAGTGATGCATTTGATACCATGATAATATTATTGAGCTCTACCAAAGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTAGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCTGTTAAAACTCTTTTGTCAGCCATGAAATTGCTTAATGTTGAATCTGAAAGTATCCTGATTGAGTCCTCACACTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCCGCTGTTGCTAGAGACACATTATCTCCCCTAGTTGCTCTAGCAAACTCTTCAGTTTTAGAAGTTGCTGAGATGGCCACATGTGCTCTGGCAAACCTTATTTTGGATAGTGAAATTGCAGAGAAAGCTATTGTAGAAGAGGTTATCTTACCTGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCAGCAATTGCTCGCCTCCTACATTCTCGGGATGTTGATCATGCTGTAACTGATTGTGTGAATCGTGCTGGAACTGTTCTCGCATTAGTTTCTTTCTTAGATTCTACTGTTAATGGATCTGTTGCCACATCAGAGGCTCTAGAAGCACTTGCCATCCTGTCCAGGTCAGAAGAGACCAGTGCAAATGCTAAACCTGCTTGTGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGTCCAATAGTCTTGTGTATTGTTGATTCAGAGCCAATGTTGCAGGATAAAACTATTGAGATTTTATCTCGATTGTGTAAGGATCAGCCTGTTGTTTTAGGAGATACTATTGTGTCAGCACCTGGATGTATATCTTCAATAGCTAAGAGGATAATAAGTTCAACAAATGTAAAGGTCAAAATTGGGGGAGCAGCACTTCTTATTTGTACTGCAAAAGCAAATCATCAGAGACTGGTGGAGGATCTCAATTCATCGAACTTGTGTGCTGATCTTATTCGGTCTCTCGTTGATATGCTTATTTCTGGACAGCCTTCTTTGGGTTACCTGAACGATGACAACAAGGAGTTCATTAGCATATGCAGGCACACAAAAGAAGAGGGCAACGGTTGTGAATCCAATGCAAGCACCAGCATTATATGTGGTGCTGACTTGGCGATATGGTTACTGTCAATTCTTGCTTGTCATGATGAAAAAAATAAAATTGCAACAATGGAGGCTGGAGCAATTGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCACAATATTCTCAGATTGATTACAAAGAAGATAACAGCATGTGGATTCATGCTTTATTGTTGGCAATATTATTTCAAAATAGAGATATCATACGTGCACATCCAGCCATGAAATCTGTACCAGCACTTACCAGTTTATTGAAGTCAGAGGAGTCAGCAAACAAGTATTTTGCTGCACAATCAATAGCTAGCCTTGTGTGTAATGGTAGCAGGGGAACACTTCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTTTGGTGCGTTATCCTGATCAAGTGGCTCTTGAGAGGTTGTTTAGAGTTGATGATATAAGAGTTGGAGTCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCAGGGGCACCATTTTTGGCACTTGGGCTTTTGACTCAGCTTGGTAAAGATTGCCCATCGAATATGAGTGTAATGGTGGAGTCTGGGGCCTTAGAGGCACTTACGAAGTATCTTTCACTGGGTCCACGAGATGCAACTGAAGAAGCTGCTACAGATCTACTAGGAATTCTGTTTAGCAGTGCTGAAATACGAAAACATGAATCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTTCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTATTTTCTGCTGACCACATTAGAAATGCAGAGTTTGCTCGGCAGGCTGTTCAACCATTGGTAGAGATTCTCAGTACCGGTTCAGAAAGGGAGCAGCATGCTGCCATTGCTGCATTGGTTGGGTTACTGAGTGAAAACCCATCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGAAGTTCTTTGTAGGATCCTTTCATCAAATTGTTCAATGGACCTGAAAAGGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACAGCAGCAGCTGCACGCTGTGTTGAACCACTTGTCTCTCTCCTTGTAACTGAGTTTAGTCCTGCTCAGATTTCAGTTGTCCGGGCATTGGATAGGCTTGTTGATGACGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTTGTTGGCCTACTGTCTGGTAGGAACTATTTACTTCATGAGGCCACTTCCAGAGCTCTGGTCAAATTAGGAAAAGACAGGCCTGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGTGTACTTGACATCTTACATGAAGCACCTGATTATCTATGTGCAGCTTTTGCTGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCCTTGTTTTTGTTGTTGACAAGACAGGAATTTGGGCCCGATGGACAGCATAGTGCGTTGCAGGTTTTGGTTAATATCTTAGAACATCCACAGTGTCGTGCTGACTATTCATTGACTTCTCGCCAAGTTATGGAACCACTTATCCCTTTGCTTGACTCTCCAATTTCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATCTACTTGTAGAAGAACGCCTTCAGAAGGATCCAGTGACACAACAAGCAATTGGCCCTCTCATTCGAGTTCTTGGATCTGGTATACACATATTGCAGCAGAGAGCTGTAAAAGCCCTAGTTAGTATTGCACTAACATGGCCAAATGAAATTGCTAAAGAGGGTGGTGTTATTGAAATTTCTAAAGTGATATTACAGGCTGACCCTTCCCTTCCTCATGCTTTATGGGAGTCTGCTGCCTCAGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTGCCTATTGCTGTATTGGTAAGGTTACTTCGATCTGGTTCAGAGAGCACGGTTGTTGGTGCTTTAAATGCTCTTCTGGTGTTGGAAAATGATGATGGAACTAGTGCAGAAGCTATGGCTGAAAGTGGTGCTGTAGAGGCTCTCTTGGAGCTCCTACGATCTCATCAGTGTGAGGAAACTGCTGCAAGACTCTTAGAAGTATTGCTGAACAATGTAAAGATTCGAGAAACGAAAGTAACAAAATCAGCTATCGTACCATTATCCCAGTACCTTTTGGACCCACAAACTCAAGCACAGCAGGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAAGCTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAGAATCTTGTGATGTACAGTCGATCAAATAGAAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATAGGTTCAAGTGATCCAGAAACATCAATTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCAAATAATACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCGATTACTGCCGCTATTGAAAAAGATTTATGGGCTTCTGGAACTGTGAATGACGAGTATCTGAAAGCCTTAAACTCTCTATTTAGCAACTTCCCAAGACTAAGAGCAACTGAACCAGCAACACTCAGCATTCCCCATCTGGTTACATCCTTAAAAACAGGTTCGGAGGCTTGTCAGGAAGCTGCATTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCAAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCATTGCTGCAGTACTTGATCCAGTCTGGCCCGCCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCATTAAGCGTGGTAACAATATGAAGCAGTCTGTTGGAAATCCAAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCACCAAGGCAAACCCAGGTGGTTTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGAAAAGTAACGATCCAGATTGATCGAGTGGTAATGCTTGGATCAGTAGCTGGAGAGTACGCATTGTTGCCGCAAAGTAAAAGTGGGCCCCCACGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAGTGA 6300 0.4276 MEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLSELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAAIVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIASAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLKSGLKTGNVVEGLLTGALKNLSSSTEGFWNATIRAGGVDILVKLLATGQPNTLANVCNLLASVMMEDASVCSKVLTAEVTKQLLKLLGPGNDDSVRAEAAGALKSLSAQCKEARREIANANGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCTSSTQIADTLGALASALMIYDDKAESTRASDPLIVEQTLLKQFRPRLPFLVQERTIEALASLYGNSILSTKLANSAAKHLLVGLITMAANEVQDELIKALLTLCKNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSDILREGSASSDAFDTMIILLSSTKEETQAKSASALAGIFETRKDVRESSIAVKTLLSAMKLLNVESESILIESSHCLAAIFLSIKENRDVAAVARDTLSPLVALANSSVLEVAEMATCALANLILDSEIAEKAIVEEVILPATRILCEGTISGKTHAAAAIARLLHSRDVDHAVTDCVNRAGTVLALVSFLDSTVNGSVATSEALEALAILSRSEETSANAKPACAVLAEFPKSISPIVLCIVDSEPMLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIAKRIISSTNVKVKIGGAALLICTAKANHQRLVEDLNSSNLCADLIRSLVDMLISGQPSLGYLNDDNKEFISICRHTKEEGNGCESNASTSIICGADLAIWLLSILACHDEKNKIATMEAGAIDVLIDRISNCFSQYSQIDYKEDNSMWIHALLLAILFQNRDIIRAHPAMKSVPALTSLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVDDIRVGVTSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGKDCPSNMSVMVESGALEALTKYLSLGPRDATEEAATDLLGILFSSAEIRKHESAFGAVTQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEFARQAVQPLVEILSTGSEREQHAAIAALVGLLSENPSRALAVADVEMNAVEVLCRILSSNCSMDLKRDAAELCCALFGNTRIRSTAAAARCVEPLVSLLVTEFSPAQISVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGRNYLLHEATSRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADYSLTSRQVMEPLIPLLDSPISAVQQLAAELLSHLLVEERLQKDPVTQQAIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLENDDGTSAEAMAESGAVEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEALARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSDPETSIQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK 2099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4961g00008 2099 Gene3D C2 domain 1977 2099 IPR035892 -
Mupr4961g00008 2099 SUPERFAMILY ARM repeat 1356 1604 IPR016024 -
Mupr4961g00008 2099 ProSiteProfiles C2 domain profile. 1959 2076 IPR000008 -
Mupr4961g00008 2099 CDD C2 1980 2070 - -
Mupr4961g00008 2099 Gene3D - 1624 1749 IPR011989 -
Mupr4961g00008 2099 SMART arm_5 1260 1300 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 681 719 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1346 1386 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1387 1427 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 473 513 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 259 308 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 515 555 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1429 1469 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1517 1555 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1805 1845 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 216 257 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1132 1175 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 84 124 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 430 471 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 42 83 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1678 1717 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 765 807 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART arm_5 1177 1218 IPR000225 GO:0005515
Mupr4961g00008 2099 SMART C2_3c 1979 2075 IPR000008 -
Mupr4961g00008 2099 FunFam Coatomer beta subunit 1564 1977 - -
Mupr4961g00008 2099 SUPERFAMILY ARM repeat 609 1011 IPR016024 -
Mupr4961g00008 2099 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 2099 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mupr4961g00008 2099 Pfam Armadillo/beta-catenin-like repeat 473 512 IPR000225 GO:0005515
Mupr4961g00008 2099 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 484 526 IPR000225 GO:0005515
Mupr4961g00008 2099 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1328 1562 - -
Mupr4961g00008 2099 Gene3D - 824 1313 IPR011989 -
Mupr4961g00008 2099 Coils Coil 245 272 - -
Mupr4961g00008 2099 Pfam C2 domain 1978 2067 IPR000008 -
Mupr4961g00008 2099 Gene3D - 6 360 IPR011989 -
Mupr4961g00008 2099 Gene3D - 361 602 IPR011989 -
Mupr4961g00008 2099 Gene3D - 1314 1617 IPR011989 -
Mupr4961g00008 2099 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1978 2081 IPR035892 -
Mupr4961g00008 2099 SUPERFAMILY ARM repeat 1029 1387 IPR016024 -
Mupr4961g00008 2099 Gene3D - 603 823 IPR011989 -
Mupr4961g00008 2099 SUPERFAMILY ARM repeat 1625 1976 IPR016024 -
Mupr4961g00008 2099 Gene3D - 1750 1976 IPR011989 -
Mupr4961g00008 2099 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1978 2099 - -
Mupr4961g00008 2099 SUPERFAMILY ARM repeat 11 589 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4961g00008 Mupr-Chr4961 100863 110178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4961g00008 444 568 U-box Gene Family AT3G46510 32.540 2.58e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4961g00008 - - gmx:100794002 3803.06