Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4961g00003 ATGACGGATTCTTCTCCTCTTATCCCTCCCCCGCCCGTCACCGAGATCGACCTCGAAGCCGCTTCCACCGAGCAATTTCAATGCCGGATTTGTCTCGAAACTGATGGTAGAGATTTCATTGCTCCTTGCAAGTGCAAAGGTACGTCAAAGTATGTACATCGAGAGTGCTTGGATCATTGGCGAGCCGTTAAGGAAGGGTTTGCATTTGCACACTGCACTACCTGCAAGGCTCCATACCATTTGCGTGTTCATTGTGCTGCTGACAGAAAATGGCGTACTTTGAAATTTCGGTTTTTTGTAACCAGAGACATTTTGTTTATATTTCTGGCTGTACAACTTGTCATTGCTTCACTGGCTTATTTGGTTTATCAGGCAGATGGTTACCAGCAGTATTGGCTTCGTCATGTTTGGGGTTTTGATAGTGAGCTGAGCTTTTACTATATATGTGGAGCACTGTTGTTTTTTGTGTTGCTTGGCCTGTCAGGGTGCTTTATTACTTGTTATGATCGAAGAGTTCGCAATGATTTGGCTCAGCCTTGTAGAGAAATATGTCTTTGTTGCTGTCAACCTGGAGTTTGTGCTGACTGCCATTTGCCAGGTACTCTTTGTATGTGGACTGATTGCACTGCATGCTTTGAGAGTTGTGGAACCATAGCAACTGAATGTGGTAGTTGCATGGGAGGTGCTGGGGAAGCAGGGCTACCATTATTATTCATAATGGCTTTGATTTTTCTGGTACTCTTTACTGTAATTGGGATATTTTACAGTGTATTAGTGGCTACAATGGTAGGACAACGGATATGGCAGCGTCATTATCACATACTTGCGAAAAGGATGCTAACAAAGGAGTATGTCGTTGAAGACATTGATGGAGAGATAACAGGGCCTAATTGGTCTCCTCCATCCCTCCCACCGGAGCATGTACAGCAGCTGAAAACATTGGGCCTCCTATGA 954 0.4455 MTDSSPLIPPPPVTEIDLEAASTEQFQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHCAADRKWRTLKFRFFVTRDILFIFLAVQLVIASLAYLVYQADGYQQYWLRHVWGFDSELSFYYICGALLFFVLLGLSGCFITCYDRRVRNDLAQPCREICLCCCQPGVCADCHLPGTLCMWTDCTACFESCGTIATECGSCMGGAGEAGLPLLFIMALIFLVLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDIDGEITGPNWSPPSLPPEHVQQLKTLGLL 317
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr4961g00003 317 Pfam RING-variant domain 28 75 IPR011016 GO:0008270
Mupr4961g00003 317 CDD RING_CH-C4HC3_MARCH 28 76 - -
Mupr4961g00003 317 ProSiteProfiles Zinc finger RING-CH-type profile. 20 82 IPR011016 GO:0008270
Mupr4961g00003 317 SMART ringv_2 27 76 IPR011016 GO:0008270
Mupr4961g00003 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 83 IPR013083 -
Mupr4961g00003 317 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 16 316 - -
Mupr4961g00003 317 SUPERFAMILY RING/U-box 22 80 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr4961g00003 Mupr-Chr4961 24068 29151 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4961g00003 5 317 C3H Transcription Factor Family AT2G22120 82.965 0.0 535