Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr495g00001 ATGGACAACAAAAATATATTGGGACAATTTGTCCGACCAAGTCAAGAAAAAGTCATGTTTGAGCCCAACTGTGCACAAGAGACCCAAGTCAAGCAGATTAAGCATGAATCGTTCACAAATTCCGTCCTCAGTAACTGGTTTCGGCGCAATCGTCTTCAGCTTCAAGGAAGAAGAGCTTGTTTCTATCCATCAACAAGGAAAATGTCAGGTGAAGAGGCTGTTGTTGTAGCTGAGCCAGCTCCTGCCATTCCAGGCGAGCCAATGGATATCATGACTGCCTTACAACTTGTGCTCAGGAAATCTCTGGCTTATGGTGGTCTTGGGCGAGGCCTTCATGAATCTGCAAAAGTGATCGAAAAACACACTGCACAGCTCTGTGTTCTTGCAGAGGACTGCGATCAGCCTGACTATGTTAAACTTGTTAAGGCCCTCTGTGCGGAGCATAATGTTAGCCTGCTGACAGTTCCGAGTGCAAAGACCCTTGGAGAATGGGCTGGGTTGTGCAAGATTGATTCAGAAGGAAAAGCTAGGAAGGTGACTGGTTGCTCCTGTGTGGTTGTCAAGGATTTTGGGGAGGAACATGAAGCCTATAATGTTGTCCTGCAGCATACGGTTATATTTAATGGCAGTGAATATTAG 639 0.4585 MDNKNILGQFVRPSQEKVMFEPNCAQETQVKQIKHESFTNSVLSNWFRRNRLQLQGRRACFYPSTRKMSGEEAVVVAEPAPAIPGEPMDIMTALQLVLRKSLAYGGLGRGLHESAKVIEKHTAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHTVIFNGSEY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr495g00001 212 Gene3D - 68 205 IPR029064 -
Mupr495g00001 212 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 93 186 IPR004038 -
Mupr495g00001 212 ProSitePatterns Ribosomal protein S12e signature. 93 111 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mupr495g00001 212 FunFam 40S ribosomal protein S12 73 206 - -
Mupr495g00001 212 SUPERFAMILY L30e-like 87 202 IPR029064 -
Mupr495g00001 212 PRINTS Ribosomal protein S12E family signature 111 127 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mupr495g00001 212 PRINTS Ribosomal protein S12E family signature 97 110 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mupr495g00001 212 PRINTS Ribosomal protein S12E family signature 152 173 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mupr495g00001 212 PRINTS Ribosomal protein S12E family signature 177 190 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mupr495g00001 212 PANTHER 40S RIBOSOMAL PROTEIN S12 80 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr495g00001 Mupr-Chr495 2623 6110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr495g00001 83 203 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 76.860 8.80e-65 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr495g00001 K02951 - gmx:100305687 251.521