Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4952g00001 ATGAAAAATGCAACAAGATTAAGAGGAAGCAAGGCAAAGAGAAGAAGCACCAAAATGCAAAGCCATCTGCTGTTCTTCTTCTATTGTTACATTGTTTTTACTGAGGCTGCAGCAGAGGATGAATTGTCAACTCTTGTCTCAATCAAATCCACTCTCATTGACCCAATGAAGCATCTGAAGGATTGGCAACTACCAAGACCTCATTGTAACTGGACTGGAGTTGGTTGCAACTCTAAAGGCTTTGTGGAGAGTCTTGACCTCTCCAACATGAACCTCAGCGGACGCGTTTCAGACCGCATTCAATCTCTTTCAAGTCTGTCTTCTTTCAACATAAGATGTAACAACTTTGCTTCATCACTTCCTAAATCACTGTCCAACCTCACCTCTCTCGAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGAGCTGCAGGCTTGAGATCAATTAATGCATCCAGCAATGATTTTTCGGGTTTTCTTCCTGATGATATTGGAAATGCAACATTGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTTGTGAGTTCAATTCCAAGGAGTTTTAAGAATTTGCAGAAGCTCAAATTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAGGATTCCAGGTTATCTCGGGGAACTCACTTCTCTGGAGACACTGATTATAGGATACAATGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTCACCAGTCTTCAATACCTTGACTTGGCTGTAGGCAGTCTCAGTGGACAAATTCCAGCTGAATTGGGTAAGCTGACGAAACTCACCACAGTTTATCTGTACCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTACTTCACTAGCATTTTTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCAGAAGAACTTGCCAAATTGGAAAACCTGAAGCTCTTGAATCTGATGAGCAACAAACTAAGTGGTCCTGTACCAGAGAAGCTTGGCGAATTGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTACAAGGTCCTTTGCCACACAACCTTGGACAGAACTGTCCTTTGCAGTGGTTGGATGTATCCTCTAACTCATTCTCCGGGGAGATCCCTCCAGGTTTGTGTACTACAGGCAATCTCTCTAAACTAATCCTCTTCAACAATTCCTTCACTGGTTCCATTCCAAGTGGACTTGCAAACTGTTTGTCTTTAGTACGTGTTCGGATTCAGAACAATCTTATCTCTGGAACTATTCCAGTTGGCTTTGGAAACCTCCTTGGCCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCACTGGGAAAATTCCTACTGATATTACCTCATCCACATCACTCTCTTTCATTGATGTATCTTGGAACCGCCTTGAGTCATCTCTACCGTCAGATATTCTCTCCATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAAATATCCCAGATGAGTTCCAGGACTGTCCATCTCTCTCTGTGCTGGATCTTTCAAACACCCACATATCTGGCACAATCCCTGAAAGCATTGCTTCTTGTCAAAAATTAGTCAACCTTGACCTTCGAAATAACCGCTTGACAGGAGAAATCCCAAAATCAGTCACAAACATGCCCACCTTATCTGTTCTTGATCTGTCCAACAATTCATTGACTGGTAGGATACCTGAAAACTTTGGCAACTCCCCAGCTCTGGAAATGCTGAACCTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGGTCACCATAAATCCTAATGATCTTATCGGCAATGCGGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCAAGTTTGGCTGTGACAAGCCATCGAAAGAGCTCACATATCAGACACATCGTTATTGGTTTTGTGACTGGCATTTCAGTGATTTTAGCTCTTGGTGCAGTATATTTTGGTGGTAGATGGTTATACAAGAGATGGCACTTGTATAACAATTTCATCAATGATTGGTTCACACACAGCAACGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAGAGGATCAGTTTCACTAGTAGTGACATCCTTGCTTGCATAAAGGAATCAAATGTCATAGGCATGGGTGGCACTGGTATTGTTTACAAAGCTGAAGTCCATAGACCTCACGTAACCGTAGCAGTGAAGAAACTATGGAGGCCACAGACAGACATGGAAAATGACAATGATGTCTTAAGAGAAGTGGAACTCCTAGGGAGAGTTAGGCACAGGAATATTGTAAGGCTGTTGGGGTATGTACACAATGAAAGGAATGTGATGATGGTTTACGAGTACATTCCTAACGGGAATCTTGGAACAGCACTGCATGGTGAACAATCGGCAAGGTTGCTTGTTGATTGGGTCTCAAGGTACAACATTGCTCTTGGAGTTGCACAAGGGCTTAACTACCTCCACCATGATTGCCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGAGGCAAGAATAGCAGATTTCGGGTTGGCAAGGATGATGATTCAAAAGAATGAGACCGTTTCCATGGTGGCTGGATCATATGGATACATTGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTACGGAGTGGTTCTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACCCTGCGTTTGAAGAATCAATTGACATAGTCGAATGGATAAGGAAAAAGAAAAACAACAAAGCCTTGTTAGAAGCACTAGATCCTGCTATAGCTAGTCAGTGCAAACATGTCCAAGAAGAAATGCTACTTGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGCGTTTGCCATAATGGGGGACAAAACACCAGTAGCATGGAAAAGCCACCGATCTTTACCACCTCCCCAGTATTCGACTGTCGCACAGTAAATGCAGGAAGAAAGAGCTTCGGTGCCTCCCATGTCAATGTCGCAGCGTGA 3126 0.436 MKNATRLRGSKAKRRSTKMQSHLLFFFYCYIVFTEAAAEDELSTLVSIKSTLIDPMKHLKDWQLPRPHCNWTGVGCNSKGFVESLDLSNMNLSGRVSDRIQSLSSLSSFNIRCNNFASSLPKSLSNLTSLESFDVSQNYFTGSFPTGLGRAAGLRSINASSNDFSGFLPDDIGNATLLESLDFRGSYFVSSIPRSFKNLQKLKFLGLSGNNFTGRIPGYLGELTSLETLIIGYNEFEGEIPAEFGNLTSLQYLDLAVGSLSGQIPAELGKLTKLTTVYLYHNNFTGKIPPQLGNITSLAFLDLSDNQISGEIPEELAKLENLKLLNLMSNKLSGPVPEKLGELKNLQVLELWKNSLQGPLPHNLGQNCPLQWLDVSSNSFSGEIPPGLCTTGNLSKLILFNNSFTGSIPSGLANCLSLVRVRIQNNLISGTIPVGFGNLLGLQRLELAKNNLTGKIPTDITSSTSLSFIDVSWNRLESSLPSDILSIPTLQTFIASHNNFGGNIPDEFQDCPSLSVLDLSNTHISGTIPESIASCQKLVNLDLRNNRLTGEIPKSVTNMPTLSVLDLSNNSLTGRIPENFGNSPALEMLNLSYNKLEGPVPSNGMLVTINPNDLIGNAGLCGGILPPCSPSLAVTSHRKSSHIRHIVIGFVTGISVILALGAVYFGGRWLYKRWHLYNNFINDWFTHSNEDWPWRLVAFQRISFTSSDILACIKESNVIGMGGTGIVYKAEVHRPHVTVAVKKLWRPQTDMENDNDVLREVELLGRVRHRNIVRLLGYVHNERNVMMVYEYIPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPAFEESIDIVEWIRKKKNNKALLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPPMRDIITMLGEAKPRRKSVCHNGGQNTSSMEKPPIFTTSPVFDCRTVNAGRKSFGASHVNVAA 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4952g00001 1041 Gene3D Phosphorylase Kinase; domain 1 713 795 - -
Mupr4952g00001 1041 Gene3D Ribonuclease Inhibitor 319 632 IPR032675 -
Mupr4952g00001 1041 SUPERFAMILY Protein kinase-like (PK-like) 709 987 IPR011009 -
Mupr4952g00001 1041 Gene3D Transferase(Phosphotransferase) domain 1 796 1008 - -
Mupr4952g00001 1041 FunFam MDIS1-interacting receptor like kinase 1 796 1006 - -
Mupr4952g00001 1041 FunFam MDIS1-interacting receptor like kinase 1 713 795 - -
Mupr4952g00001 1041 ProSitePatterns Protein kinases ATP-binding region signature. 719 743 IPR017441 GO:0005524
Mupr4952g00001 1041 PRINTS Leucine-rich repeat signature 298 311 - -
Mupr4952g00001 1041 PRINTS Leucine-rich repeat signature 559 572 - -
Mupr4952g00001 1041 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 370 632 - -
Mupr4952g00001 1041 Pfam Protein kinase domain 715 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4952g00001 1041 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 187 287 - -
Mupr4952g00001 1041 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Mupr4952g00001 1041 Gene3D Ribonuclease Inhibitor 167 262 IPR032675 -
Mupr4952g00001 1041 Pfam Leucine rich repeat 418 476 IPR001611 GO:0005515
Mupr4952g00001 1041 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Mupr4952g00001 1041 ProSiteProfiles Protein kinase domain profile. 713 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4952g00001 1041 SMART serkin_6 713 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4952g00001 1041 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Mupr4952g00001 1041 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 38 186 - -
Mupr4952g00001 1041 SUPERFAMILY L domain-like 63 359 - -
Mupr4952g00001 1041 Gene3D Ribonuclease Inhibitor 40 153 IPR032675 -
Mupr4952g00001 1041 Gene3D Ribonuclease Inhibitor 263 318 IPR032675 -
Mupr4952g00001 1041 Pfam Leucine Rich repeat 296 312 IPR001611 GO:0005515
Mupr4952g00001 1041 PANTHER RECEPTOR-LIKE PROTEIN 55 440 988 - -
Mupr4952g00001 1041 SUPERFAMILY RNI-like 260 603 - -
Mupr4952g00001 1041 SMART LRR_typ_2 439 463 IPR003591 -
Mupr4952g00001 1041 SMART LRR_typ_2 559 582 IPR003591 -
Mupr4952g00001 1041 SMART LRR_typ_2 199 223 IPR003591 -
Mupr4952g00001 1041 SMART LRR_typ_2 343 367 IPR003591 -
Mupr4952g00001 1041 SMART LRR_typ_2 295 319 IPR003591 -
Mupr4952g00001 1041 SMART LRR_typ_2 271 294 IPR003591 -
Mupr4952g00001 1041 SMART LRR_typ_2 127 151 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4952g00001 Mupr-Chr4952 12415 16344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4952g00001 24 1019 Receptor kinase-like Gene Family AT1G08590 64.300 0.0 1302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr4952g00001 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4952g00001 - - gmx:100793873 1859.34