Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4947g00001 ATGCACATTAAACTCGAGAGACCCCTTCTCATTAGTAGTTTCACCACTATTAATGGTCAAGACATTAAAGTCAATATTGCTGATAATGCATGCTTAATTATCTTTAAGTCTTTTGATGTAACACATGGTTCTATTGATGTGACTATATCTAATAACTGGTTTAGAAACCAAGAAAATGTTATGCATCTTCGATATGATGATGAATATGTGATATGTGACAGACTAGAAAATGAAAGTAACATGAAGAATGGATAG 255 0.3176 MHIKLERPLLISSFTTINGQDIKVNIADNACLIIFKSFDVTHGSIDVTISNNWFRNQENVMHLRYDDEYVICDRLENESNMKNG 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4947g00001 84 Gene3D - 13 82 IPR012334 -
Mupr4947g00001 84 PANTHER PECTATE LYASE 18-RELATED 39 70 IPR045032 GO:0030570
Mupr4947g00001 84 SUPERFAMILY Pectin lyase-like 1 67 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4947g00001 Mupr-Chr4947 4241 5184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4947g00001 38 70 Polysaccharide Lyase AT5G09280 69.697 2.16e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4947g00001 K01728 - gmx:100780437 60.4622