Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4946g00001 ATGACTAATAACATTGGTAAAGACTTCATCCATTACAAAGTTATTGACTTTAGTGATGATCCTATTAACCCCAAATCTGGAACCTTGAGGTATGAAACTTCTGTGATTCAAGGTAAAGTGTGGATCACATTGCAAAGAAACATGCACATTAAATTCGAGAGACCCCTTCTCATTAGTAGTTTCACCACTGTTGATGGTCACCAATGTAATCATCCATGGCATTCAGGTTCATTATCGCAAACCACGAACCCTTGGGATTGTAATTTGCCTGAAGGAAAGATTTGGATTGATCATAATACACTTTATGATTGTCAAGATGGTCTATTTGATGTAACACGTGATTCTATTTATGTAACTATATCTAAAAACTGGTTCATAAACCAAGACAAGGTTATGTTTCTTGGACATGGTGATGGATGTGTGAGAGACTATAACATGAAGGTTATCATTACATATAACCATTTTGAACCTAATTCCAATCAACGCATTCGAAGGACTCGCTATGAATATGTACATGTAGCTAACAATCTTTACTTAGAATGGGTGTAA 549 0.3552 MTNNIGKDFIHYKVIDFSDDPINPKSGTLRYETSVIQGKVWITLQRNMHIKFERPLLISSFTTVDGHQCNHPWHSGSLSQTTNPWDCNLPEGKIWIDHNTLYDCQDGLFDVTRDSIYVTISKNWFINQDKVMFLGHGDGCVRDYNMKVIITYNHFEPNSNQRIRRTRYEYVHVANNLYLEWV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4946g00001 182 Gene3D - 35 182 IPR012334 -
Mupr4946g00001 182 SUPERFAMILY Pectin lyase-like 10 181 IPR011050 -
Mupr4946g00001 182 SMART amb_all 4 181 IPR002022 -
Mupr4946g00001 182 Pfam Pectate lyase 46 179 IPR002022 -
Mupr4946g00001 182 PANTHER PECTATE LYASE 18-RELATED 5 69 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4946g00001 Mupr-Chr4946 1516 2352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4946g00001 1 181 Polysaccharide Lyase AT5G09280 48.624 5.33e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4946g00001 K01728 - gmx:100780437 235.343