Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4942g00006 ATGGAGGTGATATCATATTTCATTTATGGTACAATTGTTATTAACTCTCTCGAAAATGATGAGGAAGCGGCTGAGTTCATCTCTGTTTTCTTCGTCATCTTCCCCAACCAGCGATGCGCCCCACAACACTTACATACTAAAGCTTTCAACTTTTCGACACCCTCTCAGTGCAACTTGAATTGCGCGCACATGTTAGCCAAAGCCCACAACAAAGGGGATGGATCTAAGTCCCTGGCTAAGATACTGGCAGGATGGAAAGAATACAATGCCCAGCTTGATTCCTGCAATGAAGGGGATAAGCCAGTGCGCAAAGTTCCTGCAAAGGGGTCGAAGAAGGGGTGTATGAAAGGTAAAGGGGGGCCTGAGAACTCGCGGTGTAACTACAGAGGTGTTAGGCAAAGGACTTGGGGTAAGTGGGTTGCTGAAATTAGAGAGCCAAACAGAGGGAATAGGCTCTGGCTAGGTACTTTTCCCACTGCCATTGGAGCTGCCCTTGCGTATGATGAAGCGGCCAGGGCAATGTATGGTTCCTGTGCCCGCCTCAACTTTCCCAATGTTTCAGTTTCCAGTTTCTCTGAGGAATCTTCCAAAGATTCTCCAGTTGGGACTCATCCTGGTTCTTCAATGGCAGTATCTGCAAATACTGAGTCTATGATTTCACCAAGTAACTCTGGGGTAGACGCAGAAGAGGATATTGATATGGAGCCCATTTCCTTATCCTTAAGTGTAAAGCATGAGAATGGGGAAGTCGGAGATTAA 759 0.4664 MEVISYFIYGTIVINSLENDEEAAEFISVFFVIFPNQRCAPQHLHTKAFNFSTPSQCNLNCAHMLAKAHNKGDGSKSLAKILAGWKEYNAQLDSCNEGDKPVRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSEESSKDSPVGTHPGSSMAVSANTESMISPSNSGVDAEEDIDMEPISLSLSVKHENGEVGD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4942g00006 252 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Mupr4942g00006 252 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Mupr4942g00006 252 MobiDBLite consensus disorder prediction 190 252 - -
Mupr4942g00006 252 CDD AP2 126 185 IPR001471 GO:0003700|GO:0006355
Mupr4942g00006 252 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Mupr4942g00006 252 MobiDBLite consensus disorder prediction 99 118 - -
Mupr4942g00006 252 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Mupr4942g00006 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 67 222 - -
Mupr4942g00006 252 Gene3D AP2/ERF domain 127 186 IPR036955 GO:0003700|GO:0006355
Mupr4942g00006 252 SUPERFAMILY DNA-binding domain 127 184 IPR016177 GO:0003677
Mupr4942g00006 252 FunFam Ethylene-responsive transcription factor 2 126 185 - -
Mupr4942g00006 252 MobiDBLite consensus disorder prediction 190 224 - -
Mupr4942g00006 252 Pfam AP2 domain 126 176 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4942g00006 Mupr-Chr4942 40844 43067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4942g00006 62 184 AP2-EREBP Transcription Factor Family AT2G40350 60.630 6.80e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr4942g00006 AP2 5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4942g00006 - - gmx:100499747 334.724