Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4942g00001 ATGGCGACGAGAAATCGAACTGTAGAGTTCCGAAAGCACAGAGACGCCGTGAAGAGCGTGCGCGCTCCTCTTTCCTCGTCAGCATCTGCTTCCACTGGTCCCGTCATTGAAATGGTTACCACTTCGTTTCTTCGTTCCAATCGATCCTCCTATGCTCCTTTAAGCACCGACGATCCTGGCCCAGCCACTTCTAGGGATGCATTTACCGTGGGGTTGCCGCCGTCTTGGGTGGATGATTCTGAGGAAATAACTACAAATATACAGCGTGCTCGGATTAAAATTTCTGAGTTAACCAAAGCTCATGCAAAGGCTTTGATGCCTTCCTTTGATGATGGCAGAGAGGATCAGCGTCTTATTGAGACTCTCACCCAGGAAATCACGTCTCTCCTCAGAAAGTCTGAAGTAAGGCTAAAAAGACTTTCTGCTGCTGCTGGATCTTCTGAGGATTCTAATGTCAGAAAAAATGTACAGCGTTCTCTTGCTACAGACCTTCAGAACCTATCAATGGATCTCCGGCGAAAACAGTCAGCGTATTTGAAACGTTTGCAGCAGCAAAAAGAGGGTTATGATGGGGTTGACTTGGAGATGAACTTTAATGGGAGTAAATTTGAATCACACAATGATGAATTCAGTGATGTGGGTTTTAGTGAAGAGCAAATGACAAAGCTAAAGAAAAGTGAGCAGTTCTCAGTGGAAAGGGAAAGAGAGATTGAACAGGCAATTTTAAAGCATTTGGTTGTTAAGTCAGTCCACGAACTTGCACAAATCATGAAGGATCTCTCTGTCCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAGTGTTGCTACATCCGTTGAAGAGGGCTTTAAGCAGTTGCAAAAGGTTCTGTTTTTGCTCATGTTCTTGCTTACTTGCACAGAGACTTTGCTCAGTCTTTATGATTGCAATTTGGAGAACTTTTCTTTTGGATTTTTAGCTGCTGTTAGCCTAGAGAACACAGAAAAAAGGAGGAATGGTTATGTGTGCAACAGTGCTTGTTATAATGTGCTTTATCATGCTAGCTCTCTTGATACTCAAGGAGATTCTCTTCTAGTAATATTACTGGCCAGTGACCACTTTACCGGCCAGCATCATGTTAATTCATCCGTTCGATGTGAATCAAATTGCATTGTGTTTAAAGACAAGTATCATTGGCACTATGATAGTGCACTTCAG 1215 0.4288 MATRNRTVEFRKHRDAVKSVRAPLSSSASASTGPVIEMVTTSFLRSNRSSYAPLSTDDPGPATSRDAFTVGLPPSWVDDSEEITTNIQRARIKISELTKAHAKALMPSFDDGREDQRLIETLTQEITSLLRKSEVRLKRLSAAAGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQKEGYDGVDLEMNFNGSKFESHNDEFSDVGFSEEQMTKLKKSEQFSVEREREIEQAILKHLVVKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATSVEEGFKQLQKVLFLLMFLLTCTETLLSLYDCNLENFSFGFLAAVSLENTEKRRNGYVCNSACYNVLYHASSLDTQGDSLLVILLASDHFTGQHHVNSSVRCESNCIVFKDKYHWHYDSALQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4942g00001 405 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 246 295 IPR000727 -
Mupr4942g00001 405 FunFam Syntaxin-43 73 287 - -
Mupr4942g00001 405 SMART tSNARE_6 226 295 IPR000727 -
Mupr4942g00001 405 CDD SNARE_syntaxin16 232 294 - -
Mupr4942g00001 405 SUPERFAMILY t-snare proteins 72 288 IPR010989 GO:0016020|GO:0016192
Mupr4942g00001 405 Coils Coil 80 100 - -
Mupr4942g00001 405 PANTHER SYNTAXIN 79 294 IPR045242 -
Mupr4942g00001 405 Gene3D - 73 287 - -
Mupr4942g00001 405 SMART SynN_4 67 183 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4942g00001 Mupr-Chr4942 2233 5996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4942g00001 1 294 SNARE and Associated Proteins AT3G05710 66.450 4.74e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4942g00001 K08489 - gmx:100803629 484.182