Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4940g00003 ATGAATTTGAAAGCTTCTCGCCAACCATCGTTTTCATCAAGAGTACCTCATTCGCTTAGCTCCCTTGATGTTCCCAATTTTGATTCGGGGAGACACAAAAGATTTGAGAATATGTCTGGAGGCAATAAATCACCTAAAAATGATAAACAATCAATCAAATATCAGCGGATTCAACGTGGAGGGGCATCCTCAAAGGCTGATCTTTCTTGTGTAGATTATTTGCCTTCTCTTCCCAACAATGAGAATAAGCAATGCTATGGAAGTTCTCAACCGAAGTCCCCCCAGATACTGAGCACAAGTCAGCTCATCTCTGCAATAGGCCAGATATGGGATTCTGCAAGTCGTCCGCTTTCAGTTTTACTCCTGAAGGAAAATGTGAATCAGGATGATAAAGGATTCCCGAAAGAGAAAGTTCTGGATGGCATTGATGGGAAAAAGAATGACCTGGTATATGCTTCGAATGACACTAATTTCTATCCTGTTACCGGGGCTGGTGCAAAGATTGTGCAGGAAAAGTTGGATTTCCCTAAGAGATTTTCGCAGGCTAGTGATAAAAATACAAATAAAGATTTGAAAGAAATGGAACTTGGGAGGGAGGAAATGTCATGTAAATCAAGAAATGCATACTGGTGGGTGGGTAGGAATGCTGCCAAAATGCTCAATTGTCAAGTGAATGTTACCCAGCCTGAGAGCCTGGAGACTAATTCTCCAGTTGCTGGGGGGGGCATTTCAGTAGATACAAGCACCCCTACATTGCCAAATGAGAGGGATGTGTGCAGTCCTGATTCAATCACATGCGAAACTGAGTTATTATCTAATGATGCAATTTTGAACACAAGAAAAGTTAGCCCTCTGTGTTCAGACTATTTTCTTCAATTTGTGCCTGATACTAAGGCAGATGTTGGTGCTTGTCAGACCCTTTCTTCTAGTATCTGTGCGGACTATCATATTAACTCTTTAGCTTCATGTAATAGTGCTTCTGAGCAGTGCCAACATGAGATTGATGATAATGAATCAGCAGAAATTAAAAGAAGACATTTCTTGGATATAACTGATGATGAACCTAAGGTTCAGATCTTCTCTGCAACCAATCTGAAGCCTTGTAATTCCCAAGCCAAGCAAGGACATGCTTTTTCTGGGGCGTTAGCTGGTGTATGTGTCAGCCTTTGTCTGCATCCCATTGATACAATTAAGACAGTCATTCAATCATGCCGTGCTGAACACAGGTCCATCGTTTACATTGGGAAATCAATTGTTTCTGATAGAGGTTTGCTTGGACTATATCGTGGAATTACCACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCTCCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGCATCGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTGGAGAGCTGTACTATGCCGGAACATTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGTCATCTTCGCCATCTAGTACTCAACCCAACACTTCTGAGATTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGATCTGCAAACCAATATGATAGTGTGCTCCATGCTCTTTACAAAATTAGCAAGAGTGAAGGTTTGAAGGGCCTGTACAGGGGTTTAACTCCGCGGTTGATTATGTACATGTCTCAAGGATCACTATTCTTTGCTTCTTATGAATTTTTCAAGAGGGCATTTTCTCTTGAAGCATCACATCCCTCTGATTTATGCATTCAGGACAATGACGAGAATGATGAAGACAGCAAAAACTTTGACCCATCATAG 2004 0.4097 MNLKASRQPSFSSRVPHSLSSLDVPNFDSGRHKRFENMSGGNKSPKNDKQSIKYQRIQRGGASSKADLSCVDYLPSLPNNENKQCYGSSQPKSPQILSTSQLISAIGQIWDSASRPLSVLLLKENVNQDDKGFPKEKVLDGIDGKKNDLVYASNDTNFYPVTGAGAKIVQEKLDFPKRFSQASDKNTNKDLKEMELGREEMSCKSRNAYWWVGRNAAKMLNCQVNVTQPESLETNSPVAGGGISVDTSTPTLPNERDVCSPDSITCETELLSNDAILNTRKVSPLCSDYFLQFVPDTKADVGACQTLSSSICADYHINSLASCNSASEQCQHEIDDNESAEIKRRHFLDITDDEPKVQIFSATNLKPCNSQAKQGHAFSGALAGVCVSLCLHPIDTIKTVIQSCRAEHRSIVYIGKSIVSDRGLLGLYRGITTNIACSAPISAVYTFSYESVKAALLPYLPKEYYSFAHCIGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGWRAVLCRNIPHSIIKFYTYESLKQVMSSSPSSTQPNTSEILVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRAFSLEASHPSDLCIQDNDENDEDSKNFDPS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4940g00003 667 ProSiteProfiles Solute carrier (Solcar) repeat profile. 371 455 IPR018108 -
Mupr4940g00003 667 Pfam Mitochondrial carrier protein 554 640 IPR018108 -
Mupr4940g00003 667 Pfam Mitochondrial carrier protein 465 542 IPR018108 -
Mupr4940g00003 667 Pfam Mitochondrial carrier protein 376 456 IPR018108 -
Mupr4940g00003 667 SUPERFAMILY Mitochondrial carrier 376 635 IPR023395 -
Mupr4940g00003 667 Gene3D Mitochondrial carrier domain 518 652 IPR023395 -
Mupr4940g00003 667 Gene3D Mitochondrial carrier domain 357 517 IPR023395 -
Mupr4940g00003 667 ProSiteProfiles Solute carrier (Solcar) repeat profile. 550 638 IPR018108 -
Mupr4940g00003 667 MobiDBLite consensus disorder prediction 1 60 - -
Mupr4940g00003 667 FunFam Mitochondrial substrate carrier protein-like 497 652 - -
Mupr4940g00003 667 MobiDBLite consensus disorder prediction 1 25 - -
Mupr4940g00003 667 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 352 644 - -
Mupr4940g00003 667 MobiDBLite consensus disorder prediction 233 253 - -
Mupr4940g00003 667 FunFam S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform A 343 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4940g00003 Mupr-Chr4940 43975 48381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4940g00003 379 639 Chloroplast and Mitochondria Gene Families AT1G07030 31.769 1.87e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4940g00003 - - gmx:100812271 1037.71