LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4940g00003	ATGAATTTGAAAGCTTCTCGCCAACCATCGTTTTCATCAAGAGTACCTCATTCGCTTAGCTCCCTTGATGTTCCCAATTTTGATTCGGGGAGACACAAAAGATTTGAGAATATGTCTGGAGGCAATAAATCACCTAAAAATGATAAACAATCAATCAAATATCAGCGGATTCAACGTGGAGGGGCATCCTCAAAGGCTGATCTTTCTTGTGTAGATTATTTGCCTTCTCTTCCCAACAATGAGAATAAGCAATGCTATGGAAGTTCTCAACCGAAGTCCCCCCAGATACTGAGCACAAGTCAGCTCATCTCTGCAATAGGCCAGATATGGGATTCTGCAAGTCGTCCGCTTTCAGTTTTACTCCTGAAGGAAAATGTGAATCAGGATGATAAAGGATTCCCGAAAGAGAAAGTTCTGGATGGCATTGATGGGAAAAAGAATGACCTGGTATATGCTTCGAATGACACTAATTTCTATCCTGTTACCGGGGCTGGTGCAAAGATTGTGCAGGAAAAGTTGGATTTCCCTAAGAGATTTTCGCAGGCTAGTGATAAAAATACAAATAAAGATTTGAAAGAAATGGAACTTGGGAGGGAGGAAATGTCATGTAAATCAAGAAATGCATACTGGTGGGTGGGTAGGAATGCTGCCAAAATGCTCAATTGTCAAGTGAATGTTACCCAGCCTGAGAGCCTGGAGACTAATTCTCCAGTTGCTGGGGGGGGCATTTCAGTAGATACAAGCACCCCTACATTGCCAAATGAGAGGGATGTGTGCAGTCCTGATTCAATCACATGCGAAACTGAGTTATTATCTAATGATGCAATTTTGAACACAAGAAAAGTTAGCCCTCTGTGTTCAGACTATTTTCTTCAATTTGTGCCTGATACTAAGGCAGATGTTGGTGCTTGTCAGACCCTTTCTTCTAGTATCTGTGCGGACTATCATATTAACTCTTTAGCTTCATGTAATAGTGCTTCTGAGCAGTGCCAACATGAGATTGATGATAATGAATCAGCAGAAATTAAAAGAAGACATTTCTTGGATATAACTGATGATGAACCTAAGGTTCAGATCTTCTCTGCAACCAATCTGAAGCCTTGTAATTCCCAAGCCAAGCAAGGACATGCTTTTTCTGGGGCGTTAGCTGGTGTATGTGTCAGCCTTTGTCTGCATCCCATTGATACAATTAAGACAGTCATTCAATCATGCCGTGCTGAACACAGGTCCATCGTTTACATTGGGAAATCAATTGTTTCTGATAGAGGTTTGCTTGGACTATATCGTGGAATTACCACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCTCCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGCATCGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTGGAGAGCTGTACTATGCCGGAACATTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGTCATCTTCGCCATCTAGTACTCAACCCAACACTTCTGAGATTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGATCTGCAAACCAATATGATAGTGTGCTCCATGCTCTTTACAAAATTAGCAAGAGTGAAGGTTTGAAGGGCCTGTACAGGGGTTTAACTCCGCGGTTGATTATGTACATGTCTCAAGGATCACTATTCTTTGCTTCTTATGAATTTTTCAAGAGGGCATTTTCTCTTGAAGCATCACATCCCTCTGATTTATGCATTCAGGACAATGACGAGAATGATGAAGACAGCAAAAACTTTGACCCATCATAG	2004	0.4097	MNLKASRQPSFSSRVPHSLSSLDVPNFDSGRHKRFENMSGGNKSPKNDKQSIKYQRIQRGGASSKADLSCVDYLPSLPNNENKQCYGSSQPKSPQILSTSQLISAIGQIWDSASRPLSVLLLKENVNQDDKGFPKEKVLDGIDGKKNDLVYASNDTNFYPVTGAGAKIVQEKLDFPKRFSQASDKNTNKDLKEMELGREEMSCKSRNAYWWVGRNAAKMLNCQVNVTQPESLETNSPVAGGGISVDTSTPTLPNERDVCSPDSITCETELLSNDAILNTRKVSPLCSDYFLQFVPDTKADVGACQTLSSSICADYHINSLASCNSASEQCQHEIDDNESAEIKRRHFLDITDDEPKVQIFSATNLKPCNSQAKQGHAFSGALAGVCVSLCLHPIDTIKTVIQSCRAEHRSIVYIGKSIVSDRGLLGLYRGITTNIACSAPISAVYTFSYESVKAALLPYLPKEYYSFAHCIGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGWRAVLCRNIPHSIIKFYTYESLKQVMSSSPSSTQPNTSEILVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRAFSLEASHPSDLCIQDNDENDEDSKNFDPS	667

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4940g00003	667	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	371	455	IPR018108	-
	Mupr4940g00003	667	Pfam	Mitochondrial carrier protein	554	640	IPR018108	-
	Mupr4940g00003	667	Pfam	Mitochondrial carrier protein	465	542	IPR018108	-
	Mupr4940g00003	667	Pfam	Mitochondrial carrier protein	376	456	IPR018108	-
	Mupr4940g00003	667	SUPERFAMILY	Mitochondrial carrier	376	635	IPR023395	-
	Mupr4940g00003	667	Gene3D	Mitochondrial carrier domain	518	652	IPR023395	-
	Mupr4940g00003	667	Gene3D	Mitochondrial carrier domain	357	517	IPR023395	-
	Mupr4940g00003	667	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	550	638	IPR018108	-
	Mupr4940g00003	667	MobiDBLite	consensus disorder prediction	1	60	-	-
	Mupr4940g00003	667	FunFam	Mitochondrial substrate carrier protein-like	497	652	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4940g00003	Mupr-Chr4940	43975	48381	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4940g00003	379	639	Chloroplast and Mitochondria Gene Families	AT1G07030	31.769	1.87e-29	117

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4940g00003	-		-	gmx:100812271	1037.71

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