Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4938g00002 ATGTTGCATATGCTTATGGACACAGATCTAGATGTAACCCAACAGGAATTTGTCAGGACAGCACAAGAAAGTGGAAAAGCTCTGGTGTCACTTATAAATGAGGTTTTGGATCAGGCTAAGATTGAATTTGGTAAGCTAGAGCTTGAGTCTGTGCTCTTTGACATACGGGCAATTTTGGATGATGTATTGTCATTATTTTCTGAGAAGTCTCAAGGAAAAGGAGTAGAGTTGGCAGTTTATGTGTCAGATCAGGTTCCAGAATTACTAATAGGTGATCCAGGAAGATTTCGGCAAATAATTACCAATCTGATGGGTAACTCAATTAAGTTCACTGACAAAGGACATATTTTTGTCACTATCCATCTTGTTGAGGAGGTTGTCCATTCAATAGAGGTTGACAAAGAATCCAACTCAGAAAATACCTTGAGTGGTTCCCCTGTTGCTGATAGTCGTCGGAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCCCCCTCCAGTGATCTTGTCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGTATTCCTCTAGAATACCAGCCCCTCATCTTCACCCCATTCATGCAGGTAGGTCCATCCACCTCCCGAAAGCATGGGGGAACGGGTATTGGCCTAAGCATTAGCAAGTGTTTGGTTGGCCTCATGAATGGAGAAATTGGATTTGTGAGCATACCCAAGATTGGATCCACATTCACTTTTACTGCTGTATTCACAAATGGACACCGCAGTTCAAACGAGTGTAAAATTCAGCAAATCAACAACCAACCCCAGTCTGCATCTTCAGAATTTGAAGGGATGACTGCATTAATTATTGACCCAAGACCCGTTAGAGCAAAAGTGTCTAGATATCACATCCAACGGCTTGGCATTCATGTTGAAATGGTTTCAGATTTAAACCAAGGTTTGTTAACCTTGAGCAATGGGAATATAGTTATTAATATGGTCCTGATTGAGAAGGAGGTTTGGGATAGAGATTTAGGCGTGTCATCTCACTTTGTCAATAACACAAGGAAGATTGATCATGGGGTTCCTCCAAAGCTGTTCATTCTTGTTAATTCTAGTAGTTCTTTTAAAGCTAGTGTAAACTTGGGTGTTCATAATCCTACTGTCATCACCAAACCTCTGAGAGCAAGTATGCTTTCTGCCTTACTACAACGAACCATGGGCATCCAAAACAAGAGAGCTCCTCGAAATAGAGAGCTCCAAAGTTTGTCTCTAGGCCATCTTCTTCGTGGCAGGAACATTCTAATTGTAGACGACAATGCTGTGAACCGTGCAGTTGCAGCTGGTGCATTGAAAAAGTATGGAGCAGATGTGGTTTGTGTTAGCAGTGGAAAAGATGCCATCTCTTCCCTAAAGCCACCCCATCAGTTTAATGCCTGTTTCATGGATATTCAAATGCCAGAAATGGATGGATTTGAAGCTACAAAGCGAATTAGGGAGATGGAAGATCGTGTGAACAGAGAAGTATCTAAGGATGAATTTGAAAATATTAAAACCTGGCATGTACCCATTTTAGCTATGACTGCAGATGTGATACAGGCTACACATGAGGAATGCCTAAATAACGGCATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAGCTCTATAGAGAAGTCTCACGGTTTTTCAAGTCATCTTGA 1695 0.4147 MLHMLMDTDLDVTQQEFVRTAQESGKALVSLINEVLDQAKIEFGKLELESVLFDIRAILDDVLSLFSEKSQGKGVELAVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVVHSIEVDKESNSENTLSGSPVADSRRSWEGFKAFSQEGPLGSFSSPSSDLVNLIVSVEDTGEGIPLEYQPLIFTPFMQVGPSTSRKHGGTGIGLSISKCLVGLMNGEIGFVSIPKIGSTFTFTAVFTNGHRSSNECKIQQINNQPQSASSEFEGMTALIIDPRPVRAKVSRYHIQRLGIHVEMVSDLNQGLLTLSNGNIVINMVLIEKEVWDRDLGVSSHFVNNTRKIDHGVPPKLFILVNSSSSFKASVNLGVHNPTVITKPLRASMLSALLQRTMGIQNKRAPRNRELQSLSLGHLLRGRNILIVDDNAVNRAVAAGALKKYGADVVCVSSGKDAISSLKPPHQFNACFMDIQMPEMDGFEATKRIREMEDRVNREVSKDEFENIKTWHVPILAMTADVIQATHEECLNNGMDGYVSKPFEAEQLYREVSRFFKSS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4938g00002 564 ProSiteProfiles Response regulatory domain profile. 429 561 IPR001789 GO:0000160
Mupr4938g00002 564 SUPERFAMILY CheY-like 425 560 IPR011006 -
Mupr4938g00002 564 SMART REC_2 428 557 IPR001789 GO:0000160
Mupr4938g00002 564 Pfam Response regulator receiver domain 430 556 IPR001789 GO:0000160
Mupr4938g00002 564 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 91 252 IPR003594 -
Mupr4938g00002 564 Gene3D - 43 256 IPR036890 -
Mupr4938g00002 564 Gene3D - 423 564 - -
Mupr4938g00002 564 SUPERFAMILY CheY-like 278 404 IPR011006 -
Mupr4938g00002 564 CDD PRTases_typeI 391 457 IPR000836 -
Mupr4938g00002 564 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33 249 IPR036890 -
Mupr4938g00002 564 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 554 - -
Mupr4938g00002 564 CDD REC_hyHK_CKI1_RcsC-like 430 557 - -
Mupr4938g00002 564 SMART HKATPase_4 91 254 IPR003594 -
Mupr4938g00002 564 PRINTS Bacterial sensor protein C-terminal signature 197 207 IPR004358 GO:0016310|GO:0016772
Mupr4938g00002 564 PRINTS Bacterial sensor protein C-terminal signature 214 232 IPR004358 GO:0016310|GO:0016772
Mupr4938g00002 564 PRINTS Bacterial sensor protein C-terminal signature 179 193 IPR004358 GO:0016310|GO:0016772
Mupr4938g00002 564 CDD HATPase_EvgS-ArcB-TorS-like 96 252 - -
Mupr4938g00002 564 ProSiteProfiles Histidine kinase domain profile. 1 254 IPR005467 -
Mupr4938g00002 564 Gene3D - 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4938g00002 Mupr-Chr4938 14068 18731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4938g00002 1 563 Miscellaneous Gene Families AT1G27320 66.081 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr4938g00002 HATPase_c 3.9e-30 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4938g00002 K14489 - gmx:100776798 1018.84