Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4934g00002 GTAACACAAGAGTGGCCTGGCTTACCAAAAGGTGTCAAATTTGATCCATCTGATCAGGAGATAATTTGGCACTTGCTTGCAAAAGTTGGGGTAGAAGATCGAAAACCTCATCCTTTCATCGATGAATTTATTGCTACTCTGGAAATGGATGATGGAATTTGTTATACTCATCCTCAAAATTTACCTGGTGTTAAGCAAGATGGAAGTGCTTCCCACTTCTTCCATAAAGCAATCAAGGCTTACAACACCGGCTCTCGAAAGCGCCGAAAAATACTAGGGCATGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAATCAGTTGTCTTGAATGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATGTGAGCAATGTAAGAGGAGGAAGAGCTGAGAAAACTAATTGGGTTATGCATCAATATCACCTAGGAACAGAAGAGGATGAAAAGGATGGGGAGTACATTATCTCTAAAGTGTTTTACCAGCAGCAGCAAGTCAAATTGGGTGATAAAGATGACCAAGATGTTCCTGAAGCCACTGAATCTACAATTGGGAAAGTGGATCCAGTCACTCCAAAATCTGTGACTCCTGAGCCTCCTTGTAATGAAAGGTGGTGTGCAAATCTAGACCTAGGACAAGAAACACACGACACTCCTCAGCCTCCCCAGATAGATTGTTTAGATGAAATTCAAGTTGATTGCCAAGACCTTGCTACTGAACCATCCATGGTAGAAGAAGCTCAACATAGTGAAGGGATGGATAATAAAGAAAATAATGCTGAAGAAGGCCAAAAGTGGTGGGACAGTGAGTCACAGAATCTGTTGGATTCACAACAACTGGTTGAGGCGCTGTCGATGTGTGATGATCTACTCCAAAGCCAGTCTCCTGGTAGAGATGGGAAACATGAAGAACCTAAGAACCAACCTGGCCTTTCTGTTTATGCTCAGCTAGGACCAGAACATCTGAAGAAGGATATTGAAGAGTGTCAAAATCATGCCCTTGATCCTGCAAATATAGAACATGATACACCCTCAGAGTTTCGACTAAGTCAGCTGGAATTTGGTTCACAGGATAGCTTTATTTCATGGGGCTACGGCAAGGCATTATTGTATCTTCCAAGTTCTTTCAATCTTGCATGGGGAGACCTAACTTGCTCGAATACAACTCATGCTGAAGTAGACGCAGATATATTGTTTGTATGA 1215 0.4222 VTQEWPGLPKGVKFDPSDQEIIWHLLAKVGVEDRKPHPFIDEFIATLEMDDGICYTHPQNLPGVKQDGSASHFFHKAIKAYNTGSRKRRKILGHDFGDVRWHKTGRTKSVVLNGVQKGCKKIMVLYVSNVRGGRAEKTNWVMHQYHLGTEEDEKDGEYIISKVFYQQQQVKLGDKDDQDVPEATESTIGKVDPVTPKSVTPEPPCNERWCANLDLGQETHDTPQPPQIDCLDEIQVDCQDLATEPSMVEEAQHSEGMDNKENNAEEGQKWWDSESQNLLDSQQLVEALSMCDDLLQSQSPGRDGKHEEPKNQPGLSVYAQLGPEHLKKDIEECQNHALDPANIEHDTPSEFRLSQLEFGSQDSFISWGYGKALLYLPSSFNLAWGDLTCSNTTHAEVDADILFV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4934g00002 404 Pfam No apical meristem (NAM) protein 9 147 IPR003441 GO:0003677|GO:0006355
Mupr4934g00002 404 MobiDBLite consensus disorder prediction 251 268 - -
Mupr4934g00002 404 MobiDBLite consensus disorder prediction 172 203 - -
Mupr4934g00002 404 Gene3D NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
Mupr4934g00002 404 FunFam NAC domain-containing protein 8 17 170 - -
Mupr4934g00002 404 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
Mupr4934g00002 404 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 334 IPR044799 GO:0003700
Mupr4934g00002 404 MobiDBLite consensus disorder prediction 246 268 - -
Mupr4934g00002 404 MobiDBLite consensus disorder prediction 295 315 - -
Mupr4934g00002 404 SUPERFAMILY NAC domain 3 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4934g00002 Mupr-Chr4934 5685 8694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4934g00002 3 173 NAC Transcription Factor Family AT1G28470 59.302 1.11e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr4934g00002 NAM 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4934g00002 - - gmx:100799488 691.804