Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4926g00006 ATGTATGAGGATGATTTGACGATATGCATTCCCCGCCAAGTCACAAAAATATCTTCTACCTTCCATTCATTCCTTCATTCCTATGACGTGGTCGGAATTCACTTGCAGATATTTTCTATCAAAATATCATCTTATGTTAGTGTTGCCCACGTTGACTCCATTCCCCTTCCATTTTGCCCCTCACTTCTTCCTCTAATTACCAAACTGCCACATTCTCGCTATCGCAATTCACGGGTCTCGCGGGGGCATTTCCGTCATACAACGGCAACATCTTTAATATTGTCAGAGAAGAATAGAGAGAGAAAGATTTTCATTGTTGAAGCAGACATGGCGATGCCAAAAGAGAAAGAGGAAGATGAAGAGGAGGTTCAGAACAGTGGGAAGAGGTTGAAATGCATGAGGAATGAAGAAGAACAAGAATATGAAGAAGAAGAAGAAGAAGAGAGTGAGCTTCCTCTCAAGCCAGGGCTCTTCTTTTACCCCACAACCCCTACCTCCTTTGTTGTATCTGATGCTCTTGAACCCGATTTTCCCATCATATATGTCAACAAGGTCTTTGAAATCTCCACTGGATATCGTGCTGATGAGGCCCTTGGTCGCAACTGGTTTATCATCTCTTTGGGCTTTCGGTTCTTACAGTATAGAGATCCTCGAGCTCAGAGGCGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTGTTGAGTTCCAAGGTGAGCTTCTGAATTTCAGAAAGGATGGTACTCCTTTGGTGAACAGACTGAGACTTGCACCAATTCATGACGATGATGGGAGTGTGACACACGTAATAGGTATCCAACTCTTTTCTGAGGCAAACATTGATCTGAACCGTGTCTCCTATCCAGTTTTCAAAGAGACTTGCAATCAAGATTTTGATAAGAATGGTAAATATTCTGCCAAGAGTGGACAAACATTGTACAGTCAGCACCAAGAGATGTGTGGCATTCTTCAGCTTTCCGATGAAGTCTTGGCTCACAACATTTTGTCACGCTTGACACCAAGGGATGTTGCATCCATTGGCTCTGTATGCAGGAGGATCCGCCAATTAACAAAGAATGAGCATGTAAGGAAGATGGTATGTCAAAATGCGTGGGGCAAAGAAGTGACAGGCACATTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGTTTGACTCGGGAACTTACTACTCTTGAGGCTGTTTGTTGGAGAAAACTGACAGTTGGAGGTGCGGTGGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAACCGGCTTGTATTGTTTGGAGGTGAAGGAGTGGATATGCAACCTATGGATGACACTTTTGTACTAAATCTCGATGCTAAAAATCCAGAATGGCGCAGGGTTAGTGTGAAATCATCCCCACCAGGAAGGTGGGGGCACACACTCTCATGCTTAAATGGTTCTTGGTTGGTGGTTTTTGGTGGGTGTGGTAGGCAAGGATTGCTCAATGATGTGTTTGTGCTTGATTTGGATGCTCAGCAGCCAACATGGAGGGAAGTCTGTGGTGGAACCCCACCACTTCCTAGATCATGGCACAGCTCTTGCACAATTGAAGGGTCCAAATTGGTTGTCTCTGGTGGGTGCACGGATGCCGGGGTACTTCTTAGTGACACATATTTACTGGATCTCACGACAGATAATCCAACATGGAGAGAAATTCCAACTTCTTGGGCTCCTCCTTCTCGATTGGGGCACTCCCTCTCAGTCTATGGGAGGACAAAACTTCTCATGTTTGGTGGACTTGCCAAGAGTGGACACTTGCGGCTACGATCCGGCGAGGCTTATACAATTGATTTAGAAGATGAACAACCACAATGGAGGCAACTAGAATGTAGCGCATTCACGGGATTAGCGAGTCAAAGTGCTGTTGTTCCTCCTCCTAGGCTGGATCATGTTGCTGTGAGCATGCCTTGTGGGAGGATCATTATATTTGGAGGTTCAATTGCTGGTCTTCACTCACCATCTCAGCTCTTTCTGTTGGACCCTTCTGAAGAGAAACCATCTTGGAGGATCCTCAATGTTCCAGGGCAACCACCTAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTGTTGGTGTTGGGTGGACACACTGGGGAGGAATGGATACTGAATGAGTTGCATGAGTTATGCTTGGCAAGTCGACAGGACTCTGACCTGTGA 2232 0.4597 MYEDDLTICIPRQVTKISSTFHSFLHSYDVVGIHLQIFSIKISSYVSVAHVDSIPLPFCPSLLPLITKLPHSRYRNSRVSRGHFRHTTATSLILSEKNRERKIFIVEADMAMPKEKEEDEEEVQNSGKRLKCMRNEEEQEYEEEEEEESELPLKPGLFFYPTTPTSFVVSDALEPDFPIIYVNKVFEISTGYRADEALGRNWFIISLGFRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIHDDDGSVTHVIGIQLFSEANIDLNRVSYPVFKETCNQDFDKNGKYSAKSGQTLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKLLMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQLECSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDL 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4926g00006 743 Coils Coil 116 150 - -
Mupr4926g00006 743 SUPERFAMILY F-box domain 324 397 IPR036047 GO:0005515
Mupr4926g00006 743 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 143 737 - -
Mupr4926g00006 743 SMART pac_2 245 286 IPR001610 -
Mupr4926g00006 743 SUPERFAMILY PYP-like sensor domain (PAS domain) 174 281 IPR035965 -
Mupr4926g00006 743 Pfam Kelch motif 648 695 IPR011498 GO:0005515
Mupr4926g00006 743 CDD F-box_AtADO-like 329 375 - -
Mupr4926g00006 743 Gene3D PAS domain 160 292 - -
Mupr4926g00006 743 Gene3D - 629 742 IPR015915 GO:0005515
Mupr4926g00006 743 SUPERFAMILY Kelch motif 641 733 IPR015915 GO:0005515
Mupr4926g00006 743 FunFam Adagio protein 1 156 292 - -
Mupr4926g00006 743 FunFam Putative LOV domain-containing protein 607 739 - -
Mupr4926g00006 743 Pfam F-box domain 330 367 IPR001810 GO:0005515
Mupr4926g00006 743 MobiDBLite consensus disorder prediction 114 149 - -
Mupr4926g00006 743 Pfam Galactose oxidase, central domain 538 589 - -
Mupr4926g00006 743 Pfam Galactose oxidase, central domain 489 536 - -
Mupr4926g00006 743 Pfam PAS domain 173 280 IPR000014 -
Mupr4926g00006 743 CDD PAS 163 280 IPR000014 -
Mupr4926g00006 743 SUPERFAMILY Kelch motif 410 629 IPR015915 GO:0005515
Mupr4926g00006 743 FunFam Putative LOV domain-containing protein 401 606 - -
Mupr4926g00006 743 Pfam Galactose oxidase, central domain 424 474 - -
Mupr4926g00006 743 Gene3D - 323 374 - -
Mupr4926g00006 743 MobiDBLite consensus disorder prediction 114 137 - -
Mupr4926g00006 743 Gene3D - 405 628 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4926g00006 Mupr-Chr4926 52790 55752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4926g00006 166 294 AGC Kinase Gene Family AT5G58140 32.824 6.53e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4926g00006 K12116 - gmx:100301889 1202.19