Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4926g00004 ATGGTGGCAAGAAGAAAGCTCCTGAAGTTGTTATCAACCCTAAACAATTCCCAGATACTACCCCATCCCCAGCACGGCAATGCATTGGAGCACACCCCCTTTTCCAAAACCCTTAGGGTTTACGGAACCCAATCATCCAAACCCCCCGAATACGAGATGCCATCGGTAACATGGGGCGTGATCCAGGGCCGCAAAGAGAAGCTCGTTTCCCGAGTAATCATCTTTGACTATCTCAAGGCCTTGGGAATCATCCCCGACGAGTTGCACGACCTCGAGCTTCCCTCCACCGTCGACGTCATGCGCGAGCGCGTTGAGTTTCTTCAGAAATTAGGTCTAACCGTCGATGACATCAACAATTACCCTCTTATGTTGGGCTGCAGTGTCAGAAAAAACATGATCCCCGTCTTGGGCTACTTGGAAAAAATTGGGCTTGCGAGGCCCAAGCTCGGGGAATTCGTTAAGAACTACCCTCAGGTGTTGCATGCTAGTGTCATTGTTGAGCTTGCTCCTGTTGTTAAGTTCCTTAGGGGGCTTGATGTGGAGAAAGATGACATTGGCTATGTGTTGCAAAAGTACCCTGAACTTCTAGGCTTCAAGCTTGAGGGTACTATGAGCACTTCAGTGGCTTATCTTGTTAGTATTGGTGTGAACCCTAGGGATATTGGTCCAATGGTGACTCAGTATCCTTATTTCTTAGGGATGAGAGTTGGGACTGTCATAAAGCCAATGATTGATTATTTGGTCAGTTTAGGGCTGCCCAAGAAGGTTTTGGCTAGGATGTTGGAGAAGAGAGCTTATGTTCTTGGCTGTGATCTTGAGGAAACTGTGAAGCCTAATGTGGAATGTTTGATTAGTTTTGGTGTGAGGAGGGAGTGTTTGGCTTCAGTCATTGCTCAATATCCGCAGATTCTTGGGCTGCCTCTTAAGGCAAAATTGTCATCGCAGCAGTACTTTTTCAGTTTGAAGCTCAAGGTTGACCCTGAAGGGTTTGCACGTGTGGTGGAGGAAATGCCACAGGTGGTTAGCCTCCATCAACATGTGATTATGAAGCCGGTTGAGTTCCTTCTTGGGAGGACAATACCGGTGCAGGACGTGGCGAGTATGGTGATCAAGTGTCCTCAGTTGCTGGCCCTGAGAGTAGAGCTCATGAAGAACAGCTATTACTTCTTCAAGAGCGAGATGGAGAGGCCCTTGAAGGAGCTTGTGGAATTCCCAGAGTACTTTACTTATAGTTTGGAGTCCAGGATCAAACCCAGATACCAGAGGCTGAAGAGTAAAGGGATAAGATGTTCCTTGAATTGGATGCTGAATTGTAGTGACCAGAGGTTTGAAGAGAGGTTGCAGGGTCATTACATTGAAACTGAAAGTGTAGGTCCGACATTCTGTATGGGAGGGAAATTAGTGCTACCGGGGAATGGCTTAGTGTCAGATGAGGAAGAGGAGAGTGATGATGAATTGGTGAAACCATAG 1470 0.4721 MVARRKLLKLLSTLNNSQILPHPQHGNALEHTPFSKTLRVYGTQSSKPPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKALGIIPDELHDLELPSTVDVMRERVEFLQKLGLTVDDINNYPLMLGCSVRKNMIPVLGYLEKIGLARPKLGEFVKNYPQVLHASVIVELAPVVKFLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPMIDYLVSLGLPKKVLARMLEKRAYVLGCDLEETVKPNVECLISFGVRRECLASVIAQYPQILGLPLKAKLSSQQYFFSLKLKVDPEGFARVVEEMPQVVSLHQHVIMKPVEFLLGRTIPVQDVASMVIKCPQLLALRVELMKNSYYFFKSEMERPLKELVEFPEYFTYSLESRIKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGHYIETESVGPTFCMGGKLVLPGNGLVSDEEEESDDELVKP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4926g00004 489 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 398 429 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 294 326 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 SMART mt_12 331 361 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 Pfam mTERF 136 444 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 Gene3D Transcription termination factor 3, mitochondrial 100 239 IPR038538 -
Mupr4926g00004 489 Gene3D Transcription termination factor 3, mitochondrial 240 454 IPR038538 -
Mupr4926g00004 489 FunFam Transcription termination factor MTERF4, chloroplastic 238 452 - -
Mupr4926g00004 489 PANTHER CGI-12 PROTEIN-RELATED 135 265 IPR003690 GO:0003690|GO:0006355
Mupr4926g00004 489 FunFam Transcription termination factor mterf4, chloroplastic 100 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4926g00004 Mupr-Chr4926 39971 41497 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr4926g00004 mTERF 1.5e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4926g00004 K15031 - gmx:100809590 840.106