Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4926g00002 AATACACCACTCTACAATTCAACGGCAATCCATATCCTTGAAGAACAAGAAACGCTTCCCTCATTCCTTTCCCTTTTCAACTTCAGTTATGCTTTTACGCCTACGCGCGCTCTCTTTCTCTCTCTAGCCATGTCATCGCCAAACTCCGCCCCTCATCCCCACGCGCCGCTCCTCCGCCCGCGCCCCGATGCCGCCCGCCCTCCTATCCTCGCGCTTCTCCTCGGCCGCCGCGGCCACTCCGCCATGGTCCGCGAGACGGCGGCGCGTGAGCTCGACGAGCGCCGCGCCGACTGGAGCTACTCCAAGCCGGTGGTTGCGCTGGACGTCACGTGGAACATGGCCTTCGTCGTGGTCTCGTCGGTGATGCTGGCCTGCTCCGTGGCGGAGAAGCCCAACACGCCGATCCGGTGGTGGATCTGCGGCTACGCGGTGCAGTGCCTCGTCCACGTGGCGCTCGTGTGGTTCGAGTACAGGAGGAGGAACGACGCGCCAACAAGGGACGAGGAATCTGCCGGCAACCTCGAATACGACGACGTCAACGACAGCGACGACGACGACGATGTTGGAACCTCTGGGAGTTCCTCTTCCACTGCATTCACAAAACGATGTGCATCATTGAATACCATGGTTTCATTACTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATTCTTCTGCAAGATGCTCCACGTTTATACTGGTTGGCTGTTGTCTTTCTGGCATTTGATGTCTTCTTTGCTATCTTTTGTGTTGTTTTGGCATGCTTGATTGGAATTGCTCTCTGTTGTTGTTTGCCCTGTATTATTGCTATTCTCTACGCTGTTGCAGGACAGGAGGGTGCATCAGAATCGGATCTTAGTGTACTTCCAAAATACAGATTTCAAATGTTAAGCAATGAGGAAACACCTACCGAGGGAGGTGGATCAATGATTCCTTTGGAGCCCAGCAATGGTCACTCTCCGAGTGAACGAACACTTTCTCCTGAGGATGCAGAATGTTGTATATGCATCTCTTCCTATGAGGACGGAGCTGGCCTTCATGTTCTTCCTTGTAACCATCATTTCCACTCTACATGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCACTTTGCAAGTACAATATTCTGAAAGGAAATGAACAGTTTTTCCTTTTTAATATT 1179 0.5174 NTPLYNSTAIHILEEQETLPSFLSLFNFSYAFTPTRALFLSLAMSSPNSAPHPHAPLLRPRPDAARPPILALLLGRRGHSAMVRETAARELDERRADWSYSKPVVALDVTWNMAFVVVSSVMLACSVAEKPNTPIRWWICGYAVQCLVHVALVWFEYRRRNDAPTRDEESAGNLEYDDVNDSDDDDDVGTSGSSSSTAFTKRCASLNTMVSLLWWMVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSVLPKYRFQMLSNEETPTEGGGSMIPLEPSNGHSPSERTLSPEDAECCICISSYEDGAGLHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQFFLFNI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4926g00002 393 SMART ring_2 337 377 IPR001841 -
Mupr4926g00002 393 MobiDBLite consensus disorder prediction 174 188 - -
Mupr4926g00002 393 SUPERFAMILY RING/U-box 329 383 - -
Mupr4926g00002 393 FunFam E3 ubiquitin protein ligase RIE1 317 385 - -
Mupr4926g00002 393 PANTHER TARGET OF ERK KINASE MPK-1 75 386 - -
Mupr4926g00002 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 386 IPR013083 -
Mupr4926g00002 393 Pfam Ring finger domain 336 378 IPR001841 -
Mupr4926g00002 393 MobiDBLite consensus disorder prediction 165 197 - -
Mupr4926g00002 393 CDD RING-H2_PA-TM-RING 336 378 - -
Mupr4926g00002 393 ProSiteProfiles Zinc finger RING-type profile. 337 378 IPR001841 -
Mupr4926g00002 393 MobiDBLite consensus disorder prediction 305 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4926g00002 Mupr-Chr4926 22461 26157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4926g00002 44 387 C3H Transcription Factor Family AT1G68070 64.387 3.81e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4926g00002 - K13148 gmx:100797651 548.125