Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4924g00001 ATGGATTCTGCGATCTCCGTCACCACAACGGCGCACTTGGCGCTTTGCAGAGCGGTCCACCGTCATTTCATCGGAGCTCCTCAAGTTGCCACCCTCCGCCGCAACCTCAAATGCGCCGTTGCTTCCTACAACAGCTGCTGCCGCATTCCGTGTTCTTTCGCTTCTGCGCCGTCGCTGCCCTTGCTCTGCTTCTCCGGTGGAATGCTCCCGCGAAAGCCGTGCCGTCTGCGCTGCATTTCGAGCACCGCCGCTTCCTTTGCTTCTTCTGCCGGCGGGGGAAACGGCGGCGCTGGAACCGGCGACGGTGACGGAGGTGGTGGTTCCGGCGGCGAGTCTGGAGATGCTAATCTCAAATTGGTTGGAGATGCAGCTGAGGAGATTTCGGCACTTTCGCCTGATGTTATCATTCTCGATGTTTCCGGAATGGTGTGTGGGGGATGTGCGGCGAATGTGAAAAGGATACTGGAAAGTCAACCACAGGTTTCATCTGCAAGTGTAAATTTAACAACAGAGACAGCAATAGTTTGGCCTGTGTCTGAAGCAAAAAATGAACCAAATTGGCAAAAGCAATTAGGGGAGGCACTTGCAGAGCATTTAAGTAGCTGTGGTTATAATTCTAGCCTTCGAGTAGGTGAATCTCTGGCTTCTTGTGATGGGTATTGGAGAGGCATGTCTGTGTTCAGGCGCCCCTGCATGATGGGAATATATAATTGTGTACCAAATTCAGCAAGAGACAATTTCCTCCAAATTTTTGAAAGGAAGGTGGAGGAAAGACAGAGAAAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTATGTGCTGTCTGTCTTGTTGGCCATTTCTCTCATTTCTTCGCACCAAAGGCACCATGGATTCACGCATGTCACTCCGTTGGGTTTCATCTATCCTTGTCTTTGTTTACATTGCTTGGTCCTGGTCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTCTTAAAAGGACACCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCATCATTTACAGTCAGTTCACTTGCCACCTTGCTGCCAAAATTGGGTTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTTTATTGCCACCAAAAGCTCGCCTTCTATTGAACAATGGGGAAACGGAGGTTGGCTCGGTTGTTGAAGTTCCTTCTGATGGTCTTTCTGTTGGAGACCTAATTATTGTACTACCTGGAGACCGTATTCCAGCTGATGGAGTTGTGACAGCTGGTAGAAGCACTATAGATGAATCAAGTTTTACTGGTGAACCACTGCCTGTGACAAAAGTACCTGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTGACAATAGAAGTGCGGAGACCTGGTGGTGAGACTGTTATGGGAGACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTACAGCGGTTGGCTGACAAGGTTGCTGGACACTTCACTTATGGAGTGATGGTGGCCTCTGCTGCTACATTCACATTCTGGAGTCTGTATGGCACACGCATTTTACCTCCTGCTTTATATCAAGGAAGTGCAGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACTTCTTTGGGGGCTAAAAGAGGATTACTTTTGCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTGACTGTCGGTAGACCTGTTGTGACAAACATTGTCACTCCTACATGCATAAAAAATGCAATTTCAAGCCAAACTGAAGAAAATACTTTGTCTGATGTCGAAGTTCTAAGGTTAGCAGCTGGGGTAGAATCAAATTCAGTACATCCGGTGGGCAAAGCGATTGTGGATGCTGCTCGGGCATTCAATTGTCATAATGCTAAGGTAACAGATGGAACATTCCTGGAAGAACCTGGATCTGGTGCAGTGGCAACCATTGATAATAAAAAGGTTTCTGTTGGGACATTGGAATGGATTACCAGGAATGGAGTTATTAACAGTATACATGAAGAAGTGGAGAAGTGTAATAACCAATCCTTTGTCTACGTTGGAGTTGATGATACTTTAGCTGGCCTAATTTATTTTGAAGATGAGATAAGGGAAGATGCAAGAGATGTTGTTGACACACTGTGTAAGCAAAATATAGGTGTATACATGCTATCTGGAGACAAGAAGAACGTGGCTGAGCATGTTGCTTCTCTTGTTGGAATTCCCAAAGAGAAGGTGATATCTGGAGTGAAACCGGATGAGAAAAAGAAGTTCATAAATGCACTACAGAAAGATAAGAATGTTGTAGCTATGGTTGGTGATGGAATTAATGATGCTGCTGCGCTGGCTTCTGCACATATTGGTATTGCATTAGGTGGAGGTGTCGGGGCTGCTAGTGAGGTGTCTTCTATCGTATTAATGCGCAACCAGCTCTCACAGCTAGTTGATGCGTTGGAGCTTAGCAGGCTGACCATGAATACTGTAAAACAAAACCTTTGGTGGGCTTTCATATACAACATTGTGGGAATTCCAATTGCAGCTGGAGTGTTATTTCCCATAAATGGGACGGTGCTGACTCCATCAATTGCAGGGGCTCTCATGGGGCTGAGTTCCATTGGCGTAATGTCTAACTCGTTACTTTTGAGATTCAAATTTTCCTCAAAGCAGAAACAAATGCATAGCACATTGCCAAAGACCAAAATCCATGTGCATTCTGATCTGGCACAACAAAACCAGAAAACAAGCCAGCCTTATTAG 2922 0.4569 MDSAISVTTTAHLALCRAVHRHFIGAPQVATLRRNLKCAVASYNSCCRIPCSFASAPSLPLLCFSGGMLPRKPCRLRCISSTAASFASSAGGGNGGAGTGDGDGGGGSGGESGDANLKLVGDAAEEISALSPDVIILDVSGMVCGGCAANVKRILESQPQVSSASVNLTTETAIVWPVSEAKNEPNWQKQLGEALAEHLSSCGYNSSLRVGESLASCDGYWRGMSVFRRPCMMGIYNCVPNSARDNFLQIFERKVEERQRKLRESGRELAVSWALCAVCLVGHFSHFFAPKAPWIHACHSVGFHLSLSLFTLLGPGRQLILDGLKSLLKRTPNMNTLVGLGALSSFTVSSLATLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSLLPPKARLLLNNGETEVGSVVEVPSDGLSVGDLIIVLPGDRIPADGVVTAGRSTIDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTIEVRRPGGETVMGDIVRLVEEAQSREAPVQRLADKVAGHFTYGVMVASAATFTFWSLYGTRILPPALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVNTVVFDKTGTLTVGRPVVTNIVTPTCIKNAISSQTEENTLSDVEVLRLAAGVESNSVHPVGKAIVDAARAFNCHNAKVTDGTFLEEPGSGAVATIDNKKVSVGTLEWITRNGVINSIHEEVEKCNNQSFVYVGVDDTLAGLIYFEDEIREDARDVVDTLCKQNIGVYMLSGDKKNVAEHVASLVGIPKEKVISGVKPDEKKKFINALQKDKNVVAMVGDGINDAAALASAHIGIALGGGVGAASEVSSIVLMRNQLSQLVDALELSRLTMNTVKQNLWWAFIYNIVGIPIAAGVLFPINGTVLTPSIAGALMGLSSIGVMSNSLLLRFKFSSKQKQMHSTLPKTKIHVHSDLAQQNQKTSQPY 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4924g00001 973 Pfam Heavy-metal-associated domain 137 204 IPR006121 GO:0046872
Mupr4924g00001 973 PRINTS P-type cation-transporting ATPase superfamily signature 850 862 - -
Mupr4924g00001 973 PRINTS P-type cation-transporting ATPase superfamily signature 614 628 - -
Mupr4924g00001 973 PRINTS P-type cation-transporting ATPase superfamily signature 827 846 - -
Mupr4924g00001 973 PRINTS P-type cation-transporting ATPase superfamily signature 750 761 - -
Mupr4924g00001 973 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Mupr4924g00001 973 PRINTS P-type cation-transporting ATPase superfamily signature 772 782 - -
Mupr4924g00001 973 CDD P-type_ATPase_Cu-like 267 938 - -
Mupr4924g00001 973 SFLD Haloacid Dehalogenase 597 877 - -
Mupr4924g00001 973 FunFam Copper-transporting ATPase 1, putative 385 507 - -
Mupr4924g00001 973 NCBIfam copper-translocating P-type ATPase 316 937 - -
Mupr4924g00001 973 SUPERFAMILY Calcium ATPase, transmembrane domain M 365 908 IPR023298 -
Mupr4924g00001 973 Coils Coil 248 268 - -
Mupr4924g00001 973 Gene3D - 384 507 - -
Mupr4924g00001 973 Pfam haloacid dehalogenase-like hydrolase 610 840 - -
Mupr4924g00001 973 Gene3D - 605 877 IPR023214 -
Mupr4924g00001 973 NCBIfam heavy metal translocating P-type ATPase 334 936 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mupr4924g00001 973 SFLD p-type atpase 597 877 IPR044492 -
Mupr4924g00001 973 FunFam Copper-transporting ATPase PAA1, chloroplastic 133 208 - -
Mupr4924g00001 973 SUPERFAMILY Calcium ATPase, transduction domain A 415 503 IPR008250 -
Mupr4924g00001 973 SUPERFAMILY HAD-like 612 933 IPR036412 -
Mupr4924g00001 973 MobiDBLite consensus disorder prediction 88 111 - -
Mupr4924g00001 973 ProSiteProfiles Heavy-metal-associated domain profile. 133 207 IPR006121 GO:0046872
Mupr4924g00001 973 Pfam E1-E2 ATPase 398 594 - -
Mupr4924g00001 973 SUPERFAMILY HMA, heavy metal-associated domain 135 181 IPR036163 GO:0046872
Mupr4924g00001 973 PANTHER ATP7, ISOFORM B 128 938 - -
Mupr4924g00001 973 Gene3D - 625 758 IPR023299 GO:0000166
Mupr4924g00001 973 NCBIfam HAD-IC family P-type ATPase 652 906 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr4924g00001 973 NCBIfam HAD-IC family P-type ATPase 373 635 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr4924g00001 973 FunFam Copper-transporting ATPase PAA1 chloroplastic 625 758 - -
Mupr4924g00001 973 Gene3D - 134 210 - -
Mupr4924g00001 973 ProSitePatterns Heavy-metal-associated domain. 139 168 IPR017969 GO:0046872
Mupr4924g00001 973 ProSitePatterns E1-E2 ATPases phosphorylation site. 616 622 IPR018303 -
Mupr4924g00001 973 ProSitePatterns Hypothetical cof family signature 2. 827 849 - -
Mupr4924g00001 973 CDD HMA 137 204 IPR006121 GO:0046872
Mupr4924g00001 973 PRINTS H+-transporting ATPase (proton pump) signature 827 843 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr4924g00001 973 PRINTS H+-transporting ATPase (proton pump) signature 858 883 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4924g00001 Mupr-Chr4924 4929 28530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4924g00001 126 957 Primary Pumps ATPases AT1G63440 32.669 1.64e-123 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4924g00001 K17686 - gmx:100796210 1535.01