Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4920g00005 ATGAAGGCGGCTAGGCAACGTGTGAATAACGCTTACGCCTACTATGCATTATCTCTCAGTGATTTAGGGTTCATTGCATTCCCTTTTCGCCACAGTGGGTGCTCCTTTTCATGGGTGAATAGTACTTGTCCCCACTGCCAACTAACCCAGGCCACCATCATGCCACTCTTTCTTCGGCTTGATGATGTTTTATCTGTGACATTGGATGATTGGTCAGAGGATGAAATAGATGCAATGATGGAAGTTGGGGGAAATGCGGTTGCTAATTCAATTTATGAAGCTTATTTTCCTGAAGGATATACGAAACCAGGAGCAGATGCTAGTCATGAGCAGCGCTCAAAGTTCATACGGTCAAAATATGAATTTCAAGAATTTCTAAAACCGAGTTTGCGCATTGTGTCTGGAAAAAGCAGTATACAATCAAGTTCTGCCAAAAGCCACATGGATAGTTTTAGAAGTACTAGTAGTTCACAGAGAATGGAAGGTATGGTAGAATTTATTGGATTGTTGAAGGTGAAAGTGATTAAAGGCACAAATTTAGCTATCAGAGATATAAAGTCAAGTGATCCGTATGTTGTTTTGAACCTTGGCCAGCAGACTGTCCAGACAACAATAATACCCAGTAACTTGAATCCAGTCTGGAATGAGGAATACATGCTGTCTGTTCCTGAAGATTATGGACAGATGAAATTGAAAGTATTTGATTATGACACATTTTCTTCTGACGATATAATGGGAGAAGCAGACATTGATCTTCAGTCTCTGATAACATCTGCTGTGGCATTTGGAGATGCTGGAATGTTCGACGATATGCAGATAGGAAAATGGTTAAAATCCGATGACAATGCACTTATTGAGGATAGCACAGTCAATATTATTGATGGTAAGGTTAAACAAATGATGTCACTCAAGCTCCAGAATGTTGAATGTGGAGAAATAGATCTTGAACTCGAGTGGATTCCTCTTGATCAATAG 975 0.399 MKAARQRVNNAYAYYALSLSDLGFIAFPFRHSGCSFSWVNSTCPHCQLTQATIMPLFLRLDDVLSVTLDDWSEDEIDAMMEVGGNAVANSIYEAYFPEGYTKPGADASHEQRSKFIRSKYEFQEFLKPSLRIVSGKSSIQSSSAKSHMDSFRSTSSSQRMEGMVEFIGLLKVKVIKGTNLAIRDIKSSDPYVVLNLGQQTVQTTIIPSNLNPVWNEEYMLSVPEDYGQMKLKVFDYDTFSSDDIMGEADIDLQSLITSAVAFGDAGMFDDMQIGKWLKSDDNALIEDSTVNIIDGKVKQMMSLKLQNVECGEIDLELEWIPLDQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4920g00005 324 SUPERFAMILY ArfGap/RecO-like zinc finger 57 128 IPR037278 -
Mupr4920g00005 324 Gene3D Arf GTPase activating protein 32 131 IPR038508 -
Mupr4920g00005 324 ProSiteProfiles C2 domain profile. 149 265 IPR000008 -
Mupr4920g00005 324 Pfam C2 domain 168 259 IPR000008 -
Mupr4920g00005 324 Gene3D C2 domain 166 324 IPR035892 -
Mupr4920g00005 324 SMART C2_3c 169 264 IPR000008 -
Mupr4920g00005 324 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 166 324 - -
Mupr4920g00005 324 Pfam Putative GTPase activating protein for Arf 57 127 IPR001164 GO:0005096
Mupr4920g00005 324 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 164 253 IPR035892 -
Mupr4920g00005 324 CDD C2_ArfGAP 167 311 - -
Mupr4920g00005 324 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 61 324 IPR044518 GO:0005096|GO:0005543
Mupr4920g00005 324 SMART arf_gap_3 16 133 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4920g00005 Mupr-Chr4920 4882 8199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4920g00005 56 324 C2H2 Transcription Factor Family AT4G05330 68.231 1.12e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4920g00005 K12486 - gmx:100810806 462.611