Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4919g00001 ATGGAGATTGAACTGTTCCTGTTGGCCGTTACGGATATGAAGTTGGAACGGAGAATGCTTGAAAAACCGTTGGTTTATTATTCACATCGAGAATCGAAATTTGTATCAACCACAATGGTGTACTGCAGTCACTGTTCCAAAAATGTTGCTGGTGAGCGACTAGATGATGGTTTCTTATGTTGTGGAAGCTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAGCCTACATTTGTTAAGAACACAGCAGGCCAGAGTCAATTATCAGGCAATTATGTAAGAACGGTTCAAAGCGAGTTTTCTGCTTCACGTCAAAGGACTTTAGATAAAGCTTATGATGAAATTAGATATTTAAGTTCCGGCCTTGGAGTGAATGATGATAGTATGGCTGACCAAGCTTTGACCTTTTATAAAATAGCGCTTGAGCGAAATTTCACCCGAGGACGAAAATCAGAGCAAGTACAGGCTGCTTGCCTCTATATTGCATTTCGGCACAACAATAAGCCATACCTTCTTATTGATTTTTCAAATTATTTAAGGACAGATGTTTATGTGCTAGGAGCAGTTTTCTTGCAGCTTTGTCAAGTGTTAAGGCTTGGAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCTAGTCTCTTTATTCATAGATATACTAAGAATTTGTTAAAGCATGGGAGTAAAGCTGTCTCTGATACGGCCCTGACCATTGTTGCAAGCATGAAACGTGACTGGATGCAGATTGGACAAAAGAAAGAAATAATTTGGGATGTGAAGTATGAACTCTTTTTATTATTAAGATATTGCATTGCTAATGTTGGAAAACAGACAGGAAGGAAACCTAGCGGATTATGCGGTGCAGCATTATACATATCTGCTCTTGCTCATGGTTTTAAGTGCTCTAAGCCGGATATTCTTAGAATCGTCCATGTATGTGAAGCAACATTGACCAAACGATTGGTAGAATTTGAGAATACAGAGTCTTCTAGCTTGACAATTGAGGAGTTGAATACGATGGCAAAAGAGCATGAAAAAAATCCAACGGTAATGCCAGAAGGTGAATTAAAAGGATGTAGTACAAAAGATCTATTGTGTGAGCACAAGGATAGTGGGGAGCCCCATTTTGCACTTGGATTATGTGAAGCATGCTATAAGGATTTTAATAAGCTCTCTGGAGGACTTGGTGGCGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAGAGAAAGAGTGAAAAAAGCAGTTTCCGAGGAGAGTGTCGGTGAAGAATGTGCTTCGGCGAATGCATCAAATGATCAGTTTAAGAGCCACAGAGAAGATGTGCCTGCCTATGAGCCAGAAAGGGCTAATGTTGAGCAAAAGACCACTGATGATGGTAATTATGATGATTCACATAGAGAAGATGAATCAGAAACTTTCTCTGATATTGATGATGAAGATGTTGATGTGTACCTTCATGATGAAGAGGGGATGCATATCAAGAAGATACTATGGGAATCAGCAAATCGGGAGTATCTTGAGGAGCAGGCAGCCAAGGAAGCAGCGGCAGCAGCTTATAAGAAAGCTTTTGAGGCAAATTTTGAAAACTGTTCGGAGGATTTACTAGCAGCAAGAGAGCTTGCTGCATCTGCTGCTGAAGCTGTGGCAAAATCCAGAAAGGAAATGAAACAGAGAAGAGCCCAAGAGGCAAAAAATTTAGGGCCAGCTCAGTCTGCTGCAGAGGCCTTTGGCCAAATGTCTAATAAAAAAAGGAGTCTCAAATCTAAAGTCAATTTTGATCGCCTGGGTGAATTATTTAATGAACCAGAAGGTGACGATGATCCCAAGAAACACAAGAAAGTACGATTTGATAATGATGACAATTTACAGTCCAAGGTTGAGGTAAAAAATGATGATGAGATGGGATCAGCGGATGAATTTGAAGATGAAGGTGATGTAGCGGAGATATATAAAAATAGGATGTCTAGTGAAAATATGAATGAGAAATATTTCCATGATGATGATGGTTTGGGCTATAATGATTATGATGATTACTGA 2040 0.4015 MEIELFLLAVTDMKLERRMLEKPLVYYSHRESKFVSTTMVYCSHCSKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPTFVKNTAGQSQLSGNYVRTVQSEFSASRQRTLDKAYDEIRYLSSGLGVNDDSMADQALTFYKIALERNFTRGRKSEQVQAACLYIAFRHNNKPYLLIDFSNYLRTDVYVLGAVFLQLCQVLRLGEHPIVQKPVDPSLFIHRYTKNLLKHGSKAVSDTALTIVASMKRDWMQIGQKKEIIWDVKYELFLLLRYCIANVGKQTGRKPSGLCGAALYISALAHGFKCSKPDILRIVHVCEATLTKRLVEFENTESSSLTIEELNTMAKEHEKNPTVMPEGELKGCSTKDLLCEHKDSGEPHFALGLCEACYKDFNKLSGGLGGGLDPPAFQRAERERVKKAVSEESVGEECASANASNDQFKSHREDVPAYEPERANVEQKTTDDGNYDDSHREDESETFSDIDDEDVDVYLHDEEGMHIKKILWESANREYLEEQAAKEAAAAAYKKAFEANFENCSEDLLAARELAASAAEAVAKSRKEMKQRRAQEAKNLGPAQSAAEAFGQMSNKKRSLKSKVNFDRLGELFNEPEGDDDPKKHKKVRFDNDDNLQSKVEVKNDDEMGSADEFEDEGDVAEIYKNRMSSENMNEKYFHDDDGLGYNDYDDY 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4919g00001 679 MobiDBLite consensus disorder prediction 415 478 - -
Mupr4919g00001 679 Pfam Brf1-like TBP-binding domain 475 601 IPR011665 -
Mupr4919g00001 679 MobiDBLite consensus disorder prediction 564 585 - -
Mupr4919g00001 679 SUPERFAMILY Zinc beta-ribbon 36 82 - -
Mupr4919g00001 679 FunFam Transcription factor IIIB 90 kDa subunit 101 204 - -
Mupr4919g00001 679 MobiDBLite consensus disorder prediction 434 472 - -
Mupr4919g00001 679 Pfam Transcription factor TFIIB repeat 106 194 IPR013150 GO:0017025
Mupr4919g00001 679 Pfam Transcription factor TFIIB repeat 277 326 IPR013150 GO:0017025
Mupr4919g00001 679 Gene3D Single helix bin 468 517 - -
Mupr4919g00001 679 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 40 590 IPR000812 GO:0006352|GO:0070897
Mupr4919g00001 679 CDD CYCLIN_TFIIIB90_rpt1 108 198 - -
Mupr4919g00001 679 MobiDBLite consensus disorder prediction 599 645 - -
Mupr4919g00001 679 Gene3D - 211 330 - -
Mupr4919g00001 679 SUPERFAMILY Cyclin-like 276 332 IPR036915 -
Mupr4919g00001 679 Gene3D - 102 202 - -
Mupr4919g00001 679 CDD CYCLIN_TFIIIB90_rpt2 208 327 - -
Mupr4919g00001 679 MobiDBLite consensus disorder prediction 599 634 - -
Mupr4919g00001 679 SUPERFAMILY Cyclin-like 111 200 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4919g00001 39 589 Inorganic Solute Cotransporters AT2G01280 40.283 5.68e-107 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4919g00001 K15196 - gmx:100789154 946.036