LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4914g00003	ATGTCTAAAAAGGTTTTGACTTCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGACCGCCACAGGTTCCTCACAGCCCAACGCAGTAGCAGCCACAATCAGAACATACCAACTAAAGGTGGAACCAGTAACCATATCAAAGAGGGGAATAATACAACTCATAAGGCAACGGCAAATAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCATCTCGTTCATCTAGCATGTCATCTCTTGAGTTTAACAGAACAATTCAGATAGAACCACCATCAATCAATCAAACCAAAATTCCAGAAAACTCTGATTCAGGAGCAGCAATGAAGCAAGGCAACAACCAAGGCCATCAATCCCTTGATTTCTATGATATTGTCAAAGAGTCAATGCATAGAGATGTTCATGGATTGTCAGTAAAAACTGTGGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAATACATTGACTCTCCAAGGCCTTTGGAGCCTCCAAAATCTGTCAACACAGGAATTGTGGCTGCTTGGGATTCACCAAGACTCTCTTATGATGGGAGGGATGCACAAGATACATTTAAATCTGCTACAAAGACCAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAGAGTTTCAACGAAGGAACAAAATCTCGCAGCCTTTTGAAGGGTCCACAGAAAGGGTATGGAAGCTCCAGCACAATGCTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGGCCATCCAGTGTTGTGGCAAGATTAATGGGACTAGAAGTCTTCCCAGACTGCACACAAACTTGTGATACTTCACCGCGGATCTTTAGCTCCACCACCAACAAAAATGAGACTTTTGCAGGATCTAGCAGGAGTGATGAGTACAAGCAACACAGGAGTGAAGCATCCTCAAGAACAAGCACAGATTCTACCTTGCTTCAGTTCAGGAAGGATGCTTCAATCCTGAATGTGACGCCATATTCACGGTTTTCCCTAGAGCCATCTCCATGGAGGCAACATGATGCAAGCCAAGGTTCTCAATTACAGGCTTCCAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCTGTCCCTCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAAATCTAGAGTTCAAAAATTCTGGAAAAGATCTCAGAGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTAGATGTTACAAGAGATCAGGCTTCAAATTTTTCTTCTGACAATAGGAGTAATAGTAGTCTCAGTGAAAGCTCGATTGTACAAAGCCCAAGAATGAGACAGAAGGACCCAACATCCACCACCGTTGAGATGTCCAATTCAAACCAGGGTAGTAAATCGCCAATTTTCATCATGAAACCAGCAAAAGCTGCAAGAAAAAACAATAACCCTGCTTCCACAGAAATGTCATTCCATGGTAAATCAAGCCCCGGCAGGTTTAGCCCTGGAAACCCGGCAAATGGAATATTGGTTGACAAGCTTGACAGGCAAACAGCAAAAGGTGTCAGTCCAGCAATCAGACATGCCAAGGATTTCATCAGTCAACCCTTTCATTCAGTGGATAAGAGTAATAAGATGAGAACTTCAAAATTGATGCAATGCTCAAAAGTTCCCCAAGTCAACAATGGAGAAAATGCCACCAATTTTGGCAATACAGCAGAGGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCCCCACCAACTAGCCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACAACACCCAGACAAAAATTCTCTCCTTCGCAGAAAAGAAATGAACATTTCAGTGATATCAACAATCAAAGGAGGGATTTTAAGCATGAAGTTGATGATACTTCACCGGATTTTGACAGTAAGAGAAGCATGGACTCTTACAGTGACGTAGAAGTCATTCACATTGATCATTCTGATAAGATCAATGGCAACTCCATCCAGCTAAAAAGCCTGAATCAAAATAATGCGGCAAAAGAGTTGAGCAAGGAAAGCTTTGTAGCTGAGAAAATACTTACAGCAAAACAACCAAGCCTCGTGTCTGTTCTTGATGCTGCTTTCTATAGAGAAGAACCACCTTCTACAGTTAAAAAGAAATCAGACATCTCAAAAGATTTAGATGAAGCTCTGAACACTTATGATAGTAGTGAGGAGAACTCAGAAGATCTTCCTCTTTCATCCAACACTGCAAAAGCCAATGGAATCAGTGATACTGACTTGAAAACTCAAAATTTGGTCCAAATTCTTCAACAAATTGACTACAATGATGAGAGATTCACCAATTTCAGAGAGGATAAAGATCCTGACCATAAATATATATCAGAAATACTGTTATCATTGGGTCTACTCAATAGTCCAAGCTCTAGCCAAGTTTTTCATTCTTCAGGTTACCCAATAAACCCGAAGTTGTTCCTTGCACTAGAGCAAGTCAAGACAAACAAGATGTGTTTCAATATTGAACACAATGCCAAGAAGATTGCTGGGCTGAATAGTCCTGAGCAAATGCAAAGAAAGCTCATATTTGATGTCATTAATGACATTCTAGCTCAGAAACTAATATTGGAAAGTTCTACTCTGTGGTGCCAACCAAATAAGCCAGCAGGTAGAAAACTATGA	2763	0.4104	MSKKVLTSMKDENPDLQKQIGCISGFFQLFDRHRFLTAQRSSSHNQNIPTKGGTSNHIKEGNNTTHKATANNVKVARENQQFSTESSGTSMSSSSRSSSMSSLEFNRTIQIEPPSINQTKIPENSDSGAAMKQGNNQGHQSLDFYDIVKESMHRDVHGLSVKTVAKEEKKGRILKYIDSPRPLEPPKSVNTGIVAAWDSPRLSYDGRDAQDTFKSATKTKELPRLSLDSREGSIKSFNEGTKSRSLLKGPQKGYGSSSTMLKQLQEPETSRRPSSVVARLMGLEVFPDCTQTCDTSPRIFSSTTNKNETFAGSSRSDEYKQHRSEASSRTSTDSTLLQFRKDASILNVTPYSRFSLEPSPWRQHDASQGSQLQASKRSESSAKASNLSLSVYGEIEKRIANLEFKNSGKDLRALKQILDAMQRYKESLDVTRDQASNFSSDNRSNSSLSESSIVQSPRMRQKDPTSTTVEMSNSNQGSKSPIFIMKPAKAARKNNNPASTEMSFHGKSSPGRFSPGNPANGILVDKLDRQTAKGVSPAIRHAKDFISQPFHSVDKSNKMRTSKLMQCSKVPQVNNGENATNFGNTAEAKSPRLQKKFGLERRSPPTSPSSDSSSNRRQHNRQSVELSSPSTTPRQKFSPSQKRNEHFSDINNQRRDFKHEVDDTSPDFDSKRSMDSYSDVEVIHIDHSDKINGNSIQLKSLNQNNAAKELSKESFVAEKILTAKQPSLVSVLDAAFYREEPPSTVKKKSDISKDLDEALNTYDSSEENSEDLPLSSNTAKANGISDTDLKTQNLVQILQQIDYNDERFTNFREDKDPDHKYISEILLSLGLLNSPSSSQVFHSSGYPINPKLFLALEQVKTNKMCFNIEHNAKKIAGLNSPEQMQRKLIFDVINDILAQKLILESSTLWCQPNKPAGRKL	920

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	356	380	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	431	481	-	-
	Mupr4914g00003	920	PANTHER	LONGIFOLIA PROTEIN	1	917	IPR033334	GO:0051513
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	566	673	-	-
	Mupr4914g00003	920	Coils	Coil	748	768	-	-
	Mupr4914g00003	920	Coils	Coil	414	434	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	296	312	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	296	334	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	313	327	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	639	673	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	40	64	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	78	138	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	231	274	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	431	520	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	493	507	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	566	588	-	-
	Mupr4914g00003	920	Pfam	Domain of unknown function (DUF4378)	818	912	IPR025486	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	603	638	-	-
	Mupr4914g00003	920	MobiDBLite	consensus disorder prediction	231	272	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4914g00003	Mupr-Chr4914	11221	15917	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4914g00003	131	907	TRM (TON1 Recruiting Motif) Superfamily	AT1G74160	32.048	3.44e-72	254

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4914g00003	-		-	gmx:100793602	1389.02