Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4911g00001 ATGGAGGAGGGAAGTTCCGATTGCGAGGTGGAGAGGGAGCGAGTCCGCAACATCTGCATCCTGGCGCACGTGGACCACGGCAAGACAACCCTCGCCGACCACCTCATCGCCGGCGCGGGCGGCGGCATGGTCCACCCGAAGCTGGCGGGGCGTGTACGCTTCATGGACTACCTGGACGAGGAGCAGCGGCGTGCCATCACGATGAAGAGCTCGTCCATCCTCCTCCGGCACGGCCGCCACGCCGTCAACCTGATAGACTCCCCCGGACACATCGACTTCTGCAGTGAGGTCTCCACGGCGGCGCGCCTAAGCGACGGCGCGCTTCTCCTTGTGGACGCCGTGGAGGGAGTCCACATCCAGACCCACGCCGTCCTCCGCCAGTGCTGGACGGAGCGTCTGACCCCCTGTCTCGTCCTCAACAAGCTCGACCGCTTAATCACCGAACTCAAACTCACGCCCTCCGAGGCCTACACGCGCCTCTCCAGAATCGTGCACGAGGTCAACGGAATAGTCAGCGCTTACAAATCCGAAAAATATCTCTCCGACGTCGATTCCCTCCTCGCCGGCACCGGTAATATTTCCGGCACCGGGGAGACTCTCGAGGATTACGACGACAACGAGGATGTTTTTCAACCGCAGAAAGGGAACGTTATTTTCGCTTGCGCTTTAGACGGTTGGGGGTTTGGGATTCGCGAGTTTGCTGAGATTTATGCGTCTAAGCTTGGGGCCAGTGTGAATGCTTTACAGAGAGCGCTGTGGGGTGCTAAGTATTATAACCCTAAGACGAAGATGATTGTTGGGAAGAAAGGGGTCGGTGCTAATAAGAAACCCATGTTTGTTCAGTTTGTGTTGGAGCCGTTGTGGCAGGTTTATCAGGGTGCGTTGGATGGGGATAGGGGTTTGGTTGAGAAGGTTATTAGGTCGTTTAGTTTGCCGGTTCCGCAGCGGGAGCTGCAGAACAAGGATGTCAAGGTCGTGCTTCAGGCGGTTATGAGCCGGTGGCTTCCACTTTCAGATGCGGTTTTGGGGATGGTGGTTAGGTGCTTGCCTGACCCTGTTGCTGCGCAGGCGTTTCGGATATCGAGGTTGATTCCAAAACGGGAGGTTGTGGGTGTTGATGAATATGAGAGGAAGGTGGTGGAAGAGGCAGAGATGGCAAGGAAGGCGGTGGAGGTGTGTGATTGTAGGGATGAGGTTCCATGTGTTGCTTTTGTGTCGAAGATGTTTGCTGTGCCTGTTAAGATGATGCCTCCCCAAAGAAGGGAGGTTGGCAATGGTTATGGTGAGGATGGAGAGGGTGAGTCTGATGAGTGTTTTCTGGCGTTTGCTAGGATCTTTAGCGGGGTTTTGCGTGCTGGGCAGAGAGTTTTTGTGCTTTCTGCGTTGTATGATCCAGTGAAAGGGGAATCAATGCAGAAGCATATACAGGAGGCAGAATTGAAATCACTGTATTTGATGATGGGGCAAGGGTTGCAAGTAGTGACATCTGCCAGGGCAGGGAATATTGTTGCCATTGGAGGCCTTGGCCAGCATATATTGAAAAGTGCTACACTTTCTTCTACTAGAAACTGTTGGCCTTTTTCAAGTATGGCATTCCAAGTTGCTCCAACTTTGAGAGTGGCCATCGAGCCGTCTGACCCTGCAGATGTGGGTGCATTGCTCAAAGGCTTGAGGCTTCTGAATAGAGCAGATCCGTTTGTTGAGGTCACGGTGTCTGCCAGGGGAGAGCATGTTCTTGCTGCTGCTGGAGAAGTTCATCTTGAGAGATGCATAAAGGATTTAAAGGAGAGGTTTGCAAAGGTAAGCTTGGAGGTCTCTCCGCCACTTGTGTCGTACAAAGAGACCATCGAGGGAGAAGTATCCAACGTGCTGGAAAATTTGAAAGCTCTTAGCAGGAGATCGGATTATGTTGAGAAAACAACACCCAACGGAAGATGTGTTGTTCGGGTGCAGGTGATGAAACTTCTACCTTCTCTTACGAAGGTGCTCGATGAAAGCTCTGATTTACTTGGAGATATCATTGGGGTAAAGTCCGGGCAGACAGTAAAAAGTTTGGAAACCCAGAGATCAAGTATTCTTGAAATTGATAACCCAGTTGAAGTGCTAAAAAAACGCATATTGGATGCAGTGGAGGGTGATATTTTGAGCAGGAATGAGAATGACAAGGACCATGCTGAGAAATGTAAATTGAAGTGGCTAAAGATTTTGCGGAGGATATGGGCACTTGGACCAAGGCAGATTGGTCCTAACCTTCTATTTACTCCTGATATTAAAGCAGCAAGTACTGATAGCTCTGTCTTAATACGTGGTTGTCCTTGTGTATCAGAAAAGTTGGGCTTTGTGGCCGATTCTAGTATCAGTGACTCAGTTGCTGAGACGTCTTCAAATGGAAACCAAGCCTTACACATGGATGCTGAGCACCTTGAGAGTAGTGTTATATCTGGGTTCCAATTGGCCACTTCAGCTGGACCCTTGTGTAATGAATCTATGTGGGGTTTGGCATTTGTCGTTGAGGCGCGTATATCTCCATTTTCAGGACAGCTTGATGAATCGGAAACACACCAACAATCGGAGCAGTATGGCATATTTGCAGGGCAGGTAATTGCAACTGTCAAAGATGCTTGTAGAGCAGCCGTGCTTCAGAATCAGCCACGGCTTGTGGAAGCAATGTACTTTTGTGAATTGAATACGCCTACTGAATATTTGGGTCCCATGTATGCTGTACTTTCCCGAAGACGGGCCCGGGTTTTGAAGGAAGAGATGCAAGAAGGTTCCCCTTTCTTTACTGTGCATGCATATGTTCCTGTTTCTGAGAGCTTTGGTTTTGCCGACGAGCTTAGGAGGTGGACTTCTGGCGCTGCAAGTGCACTTCTTGTCCTTAGCCACTGGGAAGCACTTCCAGAGGATCCTTTCTTTGTACCTAAAACAGAAGAGGAAATTGAAGAGTTTGGAGATGGTTCCAGTGTTCTTCCAAATACGGCAAGAAAGTTAATAGATGCAGTCAGACGGCGTAAGGGCCTTCCTGTGGAGGAAAAGGTGGTGCAGCATGGAACCAAGCAAAGGACACGAGCTCGTAAA 3078 0.5029 MEEGSSDCEVERERVRNICILAHVDHGKTTLADHLIAGAGGGMVHPKLAGRVRFMDYLDEEQRRAITMKSSSILLRHGRHAVNLIDSPGHIDFCSEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWTERLTPCLVLNKLDRLITELKLTPSEAYTRLSRIVHEVNGIVSAYKSEKYLSDVDSLLAGTGNISGTGETLEDYDDNEDVFQPQKGNVIFACALDGWGFGIREFAEIYASKLGASVNALQRALWGAKYYNPKTKMIVGKKGVGANKKPMFVQFVLEPLWQVYQGALDGDRGLVEKVIRSFSLPVPQRELQNKDVKVVLQAVMSRWLPLSDAVLGMVVRCLPDPVAAQAFRISRLIPKREVVGVDEYERKVVEEAEMARKAVEVCDCRDEVPCVAFVSKMFAVPVKMMPPQRREVGNGYGEDGEGESDECFLAFARIFSGVLRAGQRVFVLSALYDPVKGESMQKHIQEAELKSLYLMMGQGLQVVTSARAGNIVAIGGLGQHILKSATLSSTRNCWPFSSMAFQVAPTLRVAIEPSDPADVGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEVSNVLENLKALSRRSDYVEKTTPNGRCVVRVQVMKLLPSLTKVLDESSDLLGDIIGVKSGQTVKSLETQRSSILEIDNPVEVLKKRILDAVEGDILSRNENDKDHAEKCKLKWLKILRRIWALGPRQIGPNLLFTPDIKAASTDSSVLIRGCPCVSEKLGFVADSSISDSVAETSSNGNQALHMDAEHLESSVISGFQLATSAGPLCNESMWGLAFVVEARISPFSGQLDESETHQQSEQYGIFAGQVIATVKDACRAAVLQNQPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARVLKEEMQEGSPFFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTRARK 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4911g00001 1026 FunFam Elongation factor Tu family protein 352 533 - -
Mupr4911g00001 1026 FunFam Elongation factor 2-like protein 6 218 - -
Mupr4911g00001 1026 Pfam Elongation factor G C-terminus 886 970 IPR000640 -
Mupr4911g00001 1026 SUPERFAMILY EF-G C-terminal domain-like 534 608 IPR035647 -
Mupr4911g00001 1026 FunFam Elongation factor like GTPase 1 884 1019 - -
Mupr4911g00001 1026 Pfam Elongation factor Tu domain 2 440 518 IPR004161 GO:0005525
Mupr4911g00001 1026 FunFam Translation elongation factor 2 535 611 - -
Mupr4911g00001 1026 Gene3D - 6 209 IPR027417 -
Mupr4911g00001 1026 PRINTS GTP-binding elongation factor signature 17 30 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 PRINTS GTP-binding elongation factor signature 99 110 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 PRINTS GTP-binding elongation factor signature 135 144 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 PRINTS GTP-binding elongation factor signature 83 93 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 PRINTS GTP-binding elongation factor signature 63 71 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 Coils Coil 1024 1026 - -
Mupr4911g00001 1026 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 11 1025 - -
Mupr4911g00001 1026 FunFam Elongation factor like GTPase 1 230 335 - -
Mupr4911g00001 1026 SUPERFAMILY EF-G C-terminal domain-like 888 986 IPR035647 -
Mupr4911g00001 1026 CDD EF2_II 400 521 - -
Mupr4911g00001 1026 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 13 252 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 SUPERFAMILY Ribosomal protein S5 domain 2-like 610 887 IPR020568 -
Mupr4911g00001 1026 SUPERFAMILY Translation proteins 390 530 IPR009000 -
Mupr4911g00001 1026 Gene3D - 631 882 IPR014721 -
Mupr4911g00001 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 350 IPR027417 -
Mupr4911g00001 1026 Pfam Elongation factor Tu GTP binding domain 14 241 IPR000795 GO:0003924|GO:0005525
Mupr4911g00001 1026 Gene3D Translation factors 352 533 - -
Mupr4911g00001 1026 CDD eEF2_snRNP_like_C 888 967 - -
Mupr4911g00001 1026 SMART EFG_C_a 885 974 IPR000640 -
Mupr4911g00001 1026 Coils Coil 613 633 - -
Mupr4911g00001 1026 CDD aeEF2_snRNP_like_IV 607 892 - -
Mupr4911g00001 1026 CDD EF2_snRNP_III 536 607 - -
Mupr4911g00001 1026 CDD EF2 16 238 - -
Mupr4911g00001 1026 Gene3D Yeast translation eEF2 (G' domain) 230 335 - -
Mupr4911g00001 1026 Gene3D - 884 1018 - -
Mupr4911g00001 1026 Gene3D Elongation Factor G (Translational Gtpase), domain 3 535 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4911g00001 Mupr-Chr4911 1321 4398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4911g00001 9 1026 Eukaryotic Initiation Factors Gene Family AT3G22980 70.233 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4911g00001 K14536 - pvu:PHAVU_003G003900g 1833.92