Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4908g00001 ATGCACACGCAGCACTGCCTCGAGGACCAGGAACCTCTTCTCACCTTCCCGCCAAAACCATTCCAGTTACCGCAATTTAACCTACACACAACACAAACCCTTCAGGTTCATCTCACACAAATTGAAACCACTCTAATTTACTACCACCAAACACCCACAATGGATATTGATATGGACATGGACATTCCCCTCCCTGAAGAGCTTGAATTTCTGGAATCAAATTCTCACATCCCCGAACAAGATCAACAACAACAAGAAGAAGACCATCACTATTACTTCCCAGAACTAGACATCGCCGAACACTACTCCCAACAACCGCCGCCAGATCTCGCGATTCCGTCGAAGACCGAATCCAACGGCCACAAGCGACCGCGTCCGCATTCTCCTCCCGAAGAGGACAAGAGAGCGAAGGTTAGGATTGCCGTCGAGGAGGATTCCGCCGCCGCCGACGAGGACTGGCTTCGCTACTCCCCTCCGTCGGCAGAGGAGAAAAGAGTGAAGGCTAGGGTTGCCGTCGAGGAGGATTCCCCCGCCGCAGACGAGGACTGGCTCCGGTACTCTCCTCCTCCGCCGGAGCCGGCGGCGGAGGAACCGACGTTCGCGAAGGAGAAGAACCTGTCGAGGTTCGCCTCGGAGATCGACGGCGAGTGCATGCCAATCACCGCGCCCAACGGTGACAGGGTTTACGCGAAGCTGAACCGGTTCCAAGGAGAGAAGCGCGCGACGAAGCTCGATTGCAGTAGATATTCTGCTGAGCTTATTTCAGAACCAATTAATGTTATACTTCAGAGGTTGGAGCAAGAGGCTTTGGCTAAGGCCTTGGAAGCTAGTTCTGAAGGTCAAAGTGTTCCAGATGTACCTGAAGCACAAATGGTCCATGAGCGACTTTGGGTTGATAAATATGCTCCGAAATCATTTACCGAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTACTCTTATGGTTGAAACAATGGGATTCTATTGTGTTTGGATCCGAAATTCGAAGCACGTCAGATGATGTTTTGTCTGCTTTGAAACGACATTCTTCTATTGTGCACAATCAGAAACCTTCGAATTCAAAGTTTCCAAGGATGAATGGAGGATCCAAATGGAGTAAGGAGAGGAGGTTTATAAATTCTAGAAGTATGGAAGAGAGTGGTAGTTCAAAGAGTGTTCAAGATGTATGGAATACGAAGTCAAGGAATATTGGTCGACCAGAACAAAAGATCCTTCTGCTCTGTGGACCACCAGGTCTTGGAAAAACAACGCTTGCACATGTAGCTGCTAGGCATTGTGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCCAAAATCCTTGATGTGGTCCAGATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTGCTGAAAGGAAGCCTGATGCAGGGAATCAAAGTTTGGGCAAAGGACAACTGGAAAGGAAGTCATCAAAGAAGGGTTCGAAAACACCATCCCTGTCAAGACCTGTGATTTGCATTTGTAATGACCTATATGCACCCGCCTTAAGACCATTACGTCAGGTAGCCAAGTTGACATATATATGTAACAAGGAAGGGATGAAAGCCAGTGCAATTGCACTCACTGCTCTAGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCCAAGAAGAAAGAAGCCCTCAATGTGAATTTCTTTTGTTCATTAGATGCTGGATTAATATTCGTATGCTTTACTGGTGTTCAGTTTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACATGTCCAAGAATGTTCTAGACATCTGGAAAGAGATTTTCCATAGGAGAAGAACAAAAAAGATGGAAAGAAAATCTCATAAAGGCAAGTCCTTTGAATTTGACTCCTTGTACTCCCTTATGTCAAAACGTGGTGATAGTGACTTGATTCTAGATGGAATTCATGAAAATATTTTGCAGCTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTCAACAATCTTGGAGTTTATGATCTAATGCATCAATATATAATGCATACACAACAGATGCCCCTTCATGTATATTTGCCCCTCCTAGCAATTACTGTACATCATATAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAGTCATATTATAGATATCGTACAATGATGATGGAAAAGATGGACATTTTGAATACCTGGCACCACAAAATCCCACCGCATATTTCGAGGCATTTATCAGCTAGTTCCTTTGTTGAAGACTTAATTTCTCCATTGTTACATATTCTGTCCCCACCAACTCTAAGACCGGTGGCATTACAACTACTATCAGATAAGGAGAAGAATGATCTTGCTCAATTAGTTAGCACAATGGTATCATACACTATAACATACAAGACTACGAAATCAGATTTGCTGCCTCATACCCTGAAGTGTGAAGTAGCAGATGGCTTGGCACTGTCTCTTGTTCCTCCTATCAGTGTCTTTATTAACTTCAAGGATTATACTTCAAACCATTATGTGCTTTCTTTAGCTATGAAGCAGGTTTTAGTGCATGAGGTTGAAAAGCACAAGATTTTACATGTTAATATTGACAAAACTGTGGCTTTAGCAAATGGAGGGCATGGTGCTATTGAGACTGGAACTAACCGCATCCCATTAGCCAATACCAATCATGCAACTGCAGTTAATGTGAAAACTATTGAAAATCAGGATGTTTTAGCGAGGCAATTAAATGCAAATCCCACAACTGTTTCACCAAACATGAATTCTGACAAAAGTGCAAGTGCAACAGACAATGTGAAAAAACCATCCAGAAGTTCCTCAAGTTTCTTTGACAGGTTTAAAAAGTTAAATGTTAAGGGTTTACAAAGTAATGACAGCTCTCTACAGAAAGAAGCTACCTTGGAGAAAAATCGATACCCTTTACTTTTTAAATATAACGAGGGCTTTACTAATGCAGTCAAAAGGCCAGTTCTTTACTCATCTAAGCTAATTTGTTCACCAAAAGCAAATTTACAAACATTCCCCGTCAATTCAGTTGTAACA 3159 0.4296 MHTQHCLEDQEPLLTFPPKPFQLPQFNLHTTQTLQVHLTQIETTLIYYHQTPTMDIDMDMDIPLPEELEFLESNSHIPEQDQQQQEEDHHYYFPELDIAEHYSQQPPPDLAIPSKTESNGHKRPRPHSPPEEDKRAKVRIAVEEDSAAADEDWLRYSPPSAEEKRVKARVAVEEDSPAADEDWLRYSPPPPEPAAEEPTFAKEKNLSRFASEIDGECMPITAPNGDRVYAKLNRFQGEKRATKLDCSRYSAELISEPINVILQRLEQEALAKALEASSEGQSVPDVPEAQMVHERLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSALKRHSSIVHNQKPSNSKFPRMNGGSKWSKERRFINSRSMEESGSSKSVQDVWNTKSRNIGRPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISAERKPDAGNQSLGKGQLERKSSKKGSKTPSLSRPVICICNDLYAPALRPLRQVAKLTYICNKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKKEALNVNFFCSLDAGLIFVCFTGVQFDIGSQVVGQKDMSKNVLDIWKEIFHRRRTKKMERKSHKGKSFEFDSLYSLMSKRGDSDLILDGIHENILQLNYHDPVMQKTVKCFNNLGVYDLMHQYIMHTQQMPLHVYLPLLAITVHHIVSQVQKPNIEWPKSYYRYRTMMMEKMDILNTWHHKIPPHISRHLSASSFVEDLISPLLHILSPPTLRPVALQLLSDKEKNDLAQLVSTMVSYTITYKTTKSDLLPHTLKCEVADGLALSLVPPISVFINFKDYTSNHYVLSLAMKQVLVHEVEKHKILHVNIDKTVALANGGHGAIETGTNRIPLANTNHATAVNVKTIENQDVLARQLNANPTTVSPNMNSDKSASATDNVKKPSRSSSSFFDRFKKLNVKGLQSNDSSLQKEATLEKNRYPLLFKYNEGFTNAVKRPVLYSSKLICSPKANLQTFPVNSVVT 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4908g00001 1053 CDD HLD_clamp_RFC 544 600 - -
Mupr4908g00001 1053 MobiDBLite consensus disorder prediction 116 136 - -
Mupr4908g00001 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 295 602 IPR027417 -
Mupr4908g00001 1053 MobiDBLite consensus disorder prediction 951 978 - -
Mupr4908g00001 1053 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 58 1030 - -
Mupr4908g00001 1053 Pfam ATPase family associated with various cellular activities (AAA) 412 517 IPR003959 GO:0005524|GO:0016887
Mupr4908g00001 1053 Gene3D - 552 604 - -
Mupr4908g00001 1053 CDD AAA 406 510 - -
Mupr4908g00001 1053 MobiDBLite consensus disorder prediction 503 527 - -
Mupr4908g00001 1053 MobiDBLite consensus disorder prediction 147 166 - -
Mupr4908g00001 1053 SMART AAA_5 408 557 IPR003593 GO:0016887
Mupr4908g00001 1053 MobiDBLite consensus disorder prediction 172 199 - -
Mupr4908g00001 1053 MobiDBLite consensus disorder prediction 103 136 - -
Mupr4908g00001 1053 Gene3D - 294 551 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4908g00001 Mupr-Chr4908 4527 29396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4908g00001 409 591 Core DNA Replication Machinery Family AT5G22010 30.653 9.01e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4908g00001 K11269 - gmx:100785041 1490.32