Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4907g00001 ATGGGTCGCCCAGCCAGTAATGGAAGCCCATCCTTTCGCTTCACTCAGGCTGAGGTAGCAGAAATGGAAGCTATTCTTCAAGGACACAACAACGCAATGCCAGCACGTGAAGCTCTTACAGCTCTAGCAGAGAAGTTCAGTAACTCACCAGATCGTAAAGGCAAGATTACTGTGCAGATGAAGCAGGTTTCAAATTGGTTTCAAAATAAGAGGCATGCAATAAGAACAAAGTCAGGTAAAACTCCTGGGAAGTTAAATATTATACCTATGCCTCGGGATGATTCAACCCCAGTTAGGAGTATACCTCAACAACCAACAGCTTCTGCTTCAGCAGTACAAGCAACTCTAGAAAATTCAGTTACGGAATTCGAAGCTAAATCTGGAAGGGATGGAGCATGGTATGATGTGGCCACCTTCCTATCCTACAGATATTTGGAGACCAGCGATCCGGAAGTGCTGGTACAAATTTCTGGTTTTGGACGCGACGAAGATGAGTGGATTAACATTCCAAAGCATGTCAGGCAACGATCTTTGCCATGTGAATCATCAGAATGTGTTGTAGTCATCCCTGGCGATCTCATACTTTGTTTTCAGGAAGGTATGGACCAAGCCCTTTACTTTGATGCCCATGTCCTTGATGCTCAAAGACGGAGGCATGATTTAAGAGGCTGTCGTTGTAGATTTTTGGTTCGCTATGATCATGATCAGTCAGAGGAAATTGTGCCTATTAGGAAGATTTGCCGCAGACCCGAAACCGATTACCGGTTACAGCAACTTCATGCTGTGGATCAGCAAAAGACTGGCATGGATCCAACTGATTACCAGTTAAAGCAACTTTATGCTGTGAATGAGGCAGCTCCTGTGTATCGGCAAAAGACTAGCATGCATCCAGCAAATGTTCATGCTAGAAGGGTTACTAAGAAAACAGTGCCAACGCAGCTGATTGCTGCAAACATTCATATGGAGACACCAGTTTTGCAAACAAATGTTCCTCTACCCCTACAAAGTATGGATGTGGATCAAAAGAAAGCTGAAATAAATACTGATGTTCAAGCAGTAAATTCCACCATCGATCCAGGCAGGGCTCCATTCACTAACGTCGTTACTACAAACAGTGTTCCTGAAGTCTCTATTCTGCAAACAAACGTTCCTCTACCTCCACAAAGTATGGATGTGGATCAAAAGAAAGCAAAAACAAATACTGATGTCCAAGCAGGAAATTCCATTATTACCCCAAGCACTGCCGCATTCACTAACATGATTACTACAAGCAGTGTTCCTGAAGTCTCTAGTCAGACTCAGAACATT 1308 0.4358 MGRPASNGSPSFRFTQAEVAEMEAILQGHNNAMPAREALTALAEKFSNSPDRKGKITVQMKQVSNWFQNKRHAIRTKSGKTPGKLNIIPMPRDDSTPVRSIPQQPTASASAVQATLENSVTEFEAKSGRDGAWYDVATFLSYRYLETSDPEVLVQISGFGRDEDEWINIPKHVRQRSLPCESSECVVVIPGDLILCFQEGMDQALYFDAHVLDAQRRRHDLRGCRCRFLVRYDHDQSEEIVPIRKICRRPETDYRLQQLHAVDQQKTGMDPTDYQLKQLYAVNEAAPVYRQKTSMHPANVHARRVTKKTVPTQLIAANIHMETPVLQTNVPLPLQSMDVDQKKAEINTDVQAVNSTIDPGRAPFTNVVTTNSVPEVSILQTNVPLPPQSMDVDQKKAKTNTDVQAGNSIITPSTAAFTNMITTSSVPEVSSQTQNI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4907g00001 436 SMART HOX_1 7 81 IPR001356 GO:0003677
Mupr4907g00001 436 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 407 IPR039276 -
Mupr4907g00001 436 CDD homeodomain 13 78 IPR001356 GO:0003677
Mupr4907g00001 436 Pfam Homeodomain 13 72 IPR001356 GO:0003677
Mupr4907g00001 436 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
Mupr4907g00001 436 SUPERFAMILY Homeodomain-like 6 77 IPR009057 -
Mupr4907g00001 436 Gene3D - 180 252 - -
Mupr4907g00001 436 Gene3D - 9 84 - -
Mupr4907g00001 436 Gene3D - 118 179 - -
Mupr4907g00001 436 Pfam SAWADEE domain 121 247 IPR032001 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4907g00001 Mupr-Chr4907 5960 18013 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr4907g00001 SAWADEE 5e-37 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4907g00001 - - gmx:100783895 541.962