Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4902g00002 ATGAGTGGCCTGCAAGAGCATCTTAAATTGGCCAGAGAATACGCCGTGGAAGGAGTGTACGACACGTCCGTGATCTTCTTCGAAGGCGCTGTTGGGCAGATCAACAAGCACCTTAACAGTGTGGAAGACCCTTTATTCCGAGCGAAATGGATGAAAGTGAAGAAAGCGGTGTGCGAGGAAATGGAAGTGGTGAAACAACTAGATGAGGAGAGAAGGGTGTTTAAGGAGTCACAGTGGTATTCCATTCCCACTACTACCTCGGTTCATGATCCCCACGTTTGGAGGACACCCAGTAGAGAAGCTACAAGGCCCGCCAGGCCCAGTGGTGGTGCAAAGGGCAGGACGGAGTCTGGGCCCAGCACAGGAATGAAAGGCCGAAAGTGGTCATATGAAGGTCGGGATCCTGAGTTGGCTGAAATGCTTCAAAGGGATGTCTTAGAAACGTCTCCTAGTGTGAGATGGGATGATGTTGCAGGCCTCACCCAAGCCAAAAAGCTTCTAGAAGAAGCCCTTATACTTCCCTTATGGATGCCTGAATATTTCCAGGGTATTAGGAGACCCTGGAAAGGTGTTCTCATGTTTGGACCTCCAGGAACTGGGAAGACGCTTCTTGCTAAAGCAGTTGCTACTGAATGTGCTACCACTTTCTTTAATGTTTCTTCTTCTACTTTGGCTTCTAAATGGCGTGGAGAGAGCGAGCGCATGGTAAGATTCTTGTTTGATCTTGCAAGAGCCTATGCACCTAGTACAATTTTCATTGATGAAATTGATTCTCTCTGTAATGCTAGGGGGGCTTCTGGGGAGCACGAATCATCCAGAAGAGTCAAGTCTGAACTTCTAGTTCAGATTGATGGTGTAAATAATAGTTCCACAAATGAAGATGGTGCCCATAAAATAGTAATGGTTTTGGCAGCCACTAACTTTCCATGGGACATAGATGAGGCACTGAGGAGAAGGCTGGAAAAGCGTATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGCTTATCCGAATCAATTTGAAGACTGTGGCCCCTGATGTGAACATAGATAAAGTGGCTGGACGGACAGAGGGTTATAGCGGGGATGACCTGACAAATGTGTGTCACGATGCTTCCCTCAATGGTATGAGGCGTAAGATAGCGGGAAAGACGCGTCATGAGATCAAGAACATGTCCAAGGATGACATTTCGAAGGATCCTGTTGCGATGTGTGATTTTCAAGAAGCTTTGAAGAAAGTTCAACCAAGTGTTTCTCAGGCTGACATTGAACGCCATGACAAACAAGAAGTTGACCTAATTAACCTGTATGGGTTTGTAAAAGTTACTATTCATCTTGCTAGATAA 1350 0.4578 MSGLQEHLKLAREYAVEGVYDTSVIFFEGAVGQINKHLNSVEDPLFRAKWMKVKKAVCEEMEVVKQLDEERRVFKESQWYSIPTTTSVHDPHVWRTPSREATRPARPSGGAKGRTESGPSTGMKGRKWSYEGRDPELAEMLQRDVLETSPSVRWDDVAGLTQAKKLLEEALILPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECATTFFNVSSSTLASKWRGESERMVRFLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQIDGVNNSSTNEDGAHKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVAPDVNIDKVAGRTEGYSGDDLTNVCHDASLNGMRRKIAGKTRHEIKNMSKDDISKDPVAMCDFQEALKKVQPSVSQADIERHDKQEVDLINLYGFVKVTIHLAR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4902g00002 449 MobiDBLite consensus disorder prediction 90 129 - -
Mupr4902g00002 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 423 IPR027417 -
Mupr4902g00002 449 Gene3D - 329 413 - -
Mupr4902g00002 449 Pfam AAA+ lid domain 348 383 IPR041569 -
Mupr4902g00002 449 FunFam Katanin p60 ATPase-containing subunit A1 1 75 - -
Mupr4902g00002 449 SMART AAA_5 187 330 IPR003593 GO:0016887
Mupr4902g00002 449 PANTHER AAA DOMAIN-CONTAINING 20 429 - -
Mupr4902g00002 449 FunFam Katanin p60 ATPase-containing subunit A1 149 339 - -
Mupr4902g00002 449 Gene3D - 149 427 IPR027417 -
Mupr4902g00002 449 FunFam Katanin p60 ATPase-containing subunit A1 329 413 - -
Mupr4902g00002 449 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 2 438 IPR028596 GO:0008017|GO:0008568|GO:0051013
Mupr4902g00002 449 CDD Kp60-NTD 2 70 - -
Mupr4902g00002 449 Gene3D - 1 75 - -
Mupr4902g00002 449 Pfam Vps4 C terminal oligomerisation domain 387 429 IPR015415 -
Mupr4902g00002 449 ProSitePatterns AAA-protein family signature. 300 319 IPR003960 GO:0005524|GO:0016887
Mupr4902g00002 449 Pfam ATPase family associated with various cellular activities (AAA) 191 328 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4902g00002 Mupr-Chr4902 8709 12584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4902g00002 143 382 Calmodulin-binding Proteins AT3G56690 41.057 8.29e-47 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4902g00002 K07767 - gmx:100801219 689.878