Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr489g00004 ATGGAAGATCACCATCACCACCACCACCATCAACATCAACATCAACCTCACCACTTTGGCATGACTGATCTCAGGCACGTGCTCAACGGGCCAAGGCCTCCCCACGACTTCCCCTCCATGCCACCGCATCCCACGGCGGAGCTCTTCCCCGGCCACCGGAATCTCACACCCTTGCCCACTCCCCAACAACACTACGAGGTTATGATGTTCAGTCGTGACATAATGCCACCTGGCCTTCACGACTTCGCTTCCACCACTCATGATTCTGCTGCGGCTACCATCGCCATGCCCACCCCATCCGCCACTACCGGATTTGATGCCGACGGTGCAGGTTGCATAGCTGGAGACGCCTCCACCGGAAGATGGCCCAGACAGGAGACTCTCACTCTTCTTGAGATCAGATCTCGCTTGGACCCTAAATTCAAAGAGGCTAATCACAAGGGACCCTTATGGGATGAAGTCTCTAGGATCATGTCCGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACAAAGGAAGGTAAGGCAGGAAGACACGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAACAGTAACACGGTTTCAATCCCGGAAACCAATGTTGTTAGCAGCATTCATTTTCAAGCAAACAGCCACGCCCCCTCCCAAACAAACCAAGACAAGTTTCACTCTCACAACAACAAACATTGTGATAGTCTCAGCCTCACTAACTCCACTAACTTTGACACGTCATCGTCTGATGATGGCAACGATCACAGCATGGAGAATGAGTCCATGGAGAAGAGGAGGAAGAGGAAGAGTGGGAGGAGTTGGAAGGTGAAGATAAAGGAGTTCATTGACTCACAGATGAGGAAGCTGGTGGAGAAGCAGAAGGAGTGGTTGGATAAACTGGTGAAGACACTTGAAGACAAGGAGAAGGAGAGGATGGTGAGAGAGGAAGAGTGGAGGAAGCAAGAGGCAAACAGGTTAGAGAGGGAGCAGAAGTTTTGGGCTAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCACTAATGGAGGCTTTGCAAAAGTTAACTGGAAGAGAAATAATGAAGGCTGAAACTAATGAGGGTATAATAAATGCAATGGCAGGTGAAGTTCAAAACCAGAATAATGAAGATGGAAGTGAGATCTTAAACAGCAGTGGTGTCATCAGAGGTGCTGATAGCTGGCCAGAATCTGAGATTGCAAGGCTTCAACAGTTGAGAGCTGAGATGGGGACAAGGTTTCCACATAGTGAAATTTCTGAAGAGGTTACATGGGAGGAAGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAGAAATGGGAAAGTATGAGTAACTATCCAAGGGAGGATAGCAAGGAAGGGAACAAGAAGCGCAAGGAAAACTCTAGAAGCTGCTTTTACTTCAAGAACAATGATGGTCAACAATCTTCCTTATACGATCAAGGAAGTGCCTATTGTGATGATATCAATCATCAAAGGCCTAATGGTTCTTCTTCACCTTCAAAATCCAATGTTGCAAATGTTCCTCAAGCTGATAGTTGCTTTCCCTTCTTGATGAGTACTGAGGGTGGAAACTTGTGGGATAACGACTATGGCTTAAAGCTCAATAAAGCAAATCAAAACCACTGA 1722 0.4652 MEDHHHHHHHQHQHQPHHFGMTDLRHVLNGPRPPHDFPSMPPHPTAELFPGHRNLTPLPTPQQHYEVMMFSRDIMPPGLHDFASTTHDSAAATIAMPTPSATTGFDADGAGCIAGDASTGRWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFFRQLEALYGENSNTVSIPETNVVSSIHFQANSHAPSQTNQDKFHSHNNKHCDSLSLTNSTNFDTSSSDDGNDHSMENESMEKRRKRKSGRSWKVKIKEFIDSQMRKLVEKQKEWLDKLVKTLEDKEKERMVREEEWRKQEANRLEREQKFWAKERAWIEARDAALMEALQKLTGREIMKAETNEGIINAMAGEVQNQNNEDGSEILNSSGVIRGADSWPESEIARLQQLRAEMGTRFPHSEISEEVTWEEVATKMACFGYERSALMCKEKWESMSNYPREDSKEGNKKRKENSRSCFYFKNNDGQQSSLYDQGSAYCDDINHQRPNGSSSPSKSNVANVPQADSCFPFLMSTEGGNLWDNDYGLKLNKANQNH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr489g00004 573 ProSiteProfiles Myb-like domain profile. 417 475 IPR001005 -
Mupr489g00004 573 MobiDBLite consensus disorder prediction 23 60 - -
Mupr489g00004 573 FunFam Trihelix transcription factor GT-2 418 480 - -
Mupr489g00004 573 MobiDBLite consensus disorder prediction 232 289 - -
Mupr489g00004 573 Pfam Myb/SANT-like DNA-binding domain 121 207 IPR044822 -
Mupr489g00004 573 Pfam Myb/SANT-like DNA-binding domain 416 501 IPR044822 -
Mupr489g00004 573 MobiDBLite consensus disorder prediction 269 285 - -
Mupr489g00004 573 PANTHER FI21293P1 104 558 - -
Mupr489g00004 573 CDD GT1 418 480 - -
Mupr489g00004 573 Gene3D - 122 184 - -
Mupr489g00004 573 Gene3D - 418 479 - -
Mupr489g00004 573 ProSiteProfiles Myb-like domain profile. 114 179 IPR001005 -
Mupr489g00004 573 CDD GT1 121 186 - -
Mupr489g00004 573 FunFam trihelix transcription factor PTL-like 122 184 - -
Mupr489g00004 573 MobiDBLite consensus disorder prediction 250 268 - -
Mupr489g00004 573 Coils Coil 308 335 - -
Mupr489g00004 573 SMART sant 118 181 IPR001005 -
Mupr489g00004 573 SMART sant 414 477 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr489g00004 Mupr-Chr489 39320 42070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr489g00004 13 568 Trihelix Transcription Factor Family AT5G03680 44.314 2.84e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr489g00004 Myb_DNA-bind_4 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr489g00004 - - aprc:113870891 883.634