Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4889g00006 ATGAACCACCTAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTATATGGAATACAACCTATACCAACTTATGAAAGACAGGGAAAAACTATTTTTCGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTCTTCCAAGGTCTTGCTCACATGCACCAGCGTGGATACTTCCATCGTGACCTGAAGCCTGAAAACTTGCTGGTTACTAAGGATATCATCAAAATCCCAGTAAAGCTTGAAACCCTCACGCTGGAATGGGATTCATCAAAGGAAAATTCAACTAGAAAAAGCAATGACCATCAAAATGATATATTTAATCGTATGGAGCAACCTGAGGATCTCAAAGGTGGCTCTTTGTTTCCCCATCAGCTCGAGGCTCTGAACTGGTTGCGTGTGAATGTTGTAGAATATCATGGCTGTGCTAAAGCAAGAGCCATAATTCGCCAGTATGAATGGCATGCAAATGATCCGAGTAGATTGAATAAGAAAACAAAAGCCTATAAATTTAATGTGCTTTTAACTACATATGAAATGATTCTGGCTGATTCTTCTCATTTGCGTGGAATGCCTTGGGAAGTTCTTGTTGTTGATGAAGGCCATCGAATGAAGAATTCAGGAACCAGCTTCATTTCCTTCACTATCTTCATCTGA 678 0.3894 MNHLNIVKLKEVIRESDILYFVFEYMEYNLYQLMKDREKLFFEGEVRNWCFQVFQGLAHMHQRGYFHRDLKPENLLVTKDIIKIPVKLETLTLEWDSSKENSTRKSNDHQNDIFNRMEQPEDLKGGSLFPHQLEALNWLRVNVVEYHGCAKARAIIRQYEWHANDPSRLNKKTKAYKFNVLLTTYEMILADSSHLRGMPWEVLVVDEGHRMKNSGTSFISFTIFI 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4889g00006 225 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4889g00006 225 SMART serkin_6 2 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4889g00006 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 218 IPR027417 -
Mupr4889g00006 225 SUPERFAMILY Protein kinase-like (PK-like) 2 80 IPR011009 -
Mupr4889g00006 225 Gene3D Phosphorylase Kinase; domain 1 1 24 - -
Mupr4889g00006 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 65 77 IPR008271 GO:0004672|GO:0006468
Mupr4889g00006 225 Pfam Protein kinase domain 1 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4889g00006 225 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 141 217 - -
Mupr4889g00006 225 Gene3D Transferase(Phosphotransferase) domain 1 25 125 - -
Mupr4889g00006 225 Gene3D - 134 218 IPR038718 -
Mupr4889g00006 225 Pfam SNF2-related domain 156 216 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4889g00006 Mupr-Chr4889 22613 23601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4889g00006 1 80 Core Cell Cycle Gene Families AT1G66750 33.750 7.20e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Mupr4889g00006 SNF2_N 8.1e-08 CL0023
TR SNF2 Mupr4889g00006 SNF2_N 8.1e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4889g00006 K08829 - gmx:100810150 164.466