Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr486g00006 ATGTTGAAGACGAAGGCATTCCAAGGCGCGAACGTGTTCATGTCGCGAAACCTCGTGCCGCCCGAAGTCTTCGATGCGCTACATGACGCCGTCAAAGATAACGGCGCCCAACTCCACCTTTGCTGCGACCCTTCCCGTAACGGCCCCAACGATTACCACATAATTTCTTCTACCAAACACGAGAAGTTCGATGATCTTAAATCCAAGGGCTGCAAATTGCTCGGTCCTAGATGTGTTCTTTCGTGTGCCAAAGTACCAAGGCCTCTGCCTAACCAAGGCTTCACTTGTTGCCTTGCAATGGACGGCGTCAAAGTGCTCGCGTCTGGCTTTGATATGGATGAGAAGTGTTTAGTGTATGTAATCCTGCAGGTTAGGATAGAAGAGTTAGTGGCTGAAATGGGGGGAGTTCTACACACTAAAGCATCATTGGATTTGAACTTTGTCGTAGTGAAAAATGTTTTAGCTGCAAAGTACAAGTGGGCATTGAATGTATTGAAGAAACCAATAGTCACTTCTGAATGGTTAAAACAATGCTCAGATGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACTGGAATCCCAGCAGATAAGCGTAAAGAGATGGAGAAGCTTATTTTACAAAATGCCCCAGAAGGTGACAAATATAAGGTGGCAAAACGATGGGGCCACATTCATATTGTGACAAGGAAATGGTTTGATCAATCTATTGCTCGAAGAGAACCTGGAAGGAATGCAACTGAGGAGCAGAGATTGATCTTCAAACAGCAGCAAGAACTAGACAGCAAGGCACGGTTTCTCATCTACCAATGTGTAAATTCAAAGATATTCAACAAGATCTCCAATGCATCCACCTCAAAGGAAGCATGA 903 0.4463 MLKTKAFQGANVFMSRNLVPPEVFDALHDAVKDNGAQLHLCCDPSRNGPNDYHIISSTKHEKFDDLKSKGCKLLGPRCVLSCAKVPRPLPNQGFTCCLAMDGVKVLASGFDMDEKCLVYVILQVRIEELVAEMGGVLHTKASLDLNFVVVKNVLAAKYKWALNVLKKPIVTSEWLKQCSDEHRVVPQESYKVLPFSGLKICVTGIPADKRKEMEKLILQNAPEGDKYKVAKRWGHIHIVTRKWFDQSIARREPGRNATEEQRLIFKQQQELDSKARFLIYQCVNSKIFNKISNASTSKEA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr486g00006 300 FunFam Transcription coactivator 97 193 - -
Mupr486g00006 300 Pfam BRCA1 C Terminus (BRCT) domain 126 178 IPR001357 -
Mupr486g00006 300 Gene3D BRCT domain 215 255 IPR036420 -
Mupr486g00006 300 CDD BRCT_TopBP1_rpt2_like 194 251 - -
Mupr486g00006 300 ProSiteProfiles BRCT domain profile. 126 192 IPR001357 -
Mupr486g00006 300 Gene3D BRCT domain 98 194 IPR036420 -
Mupr486g00006 300 SUPERFAMILY BRCT domain 58 191 IPR036420 -
Mupr486g00006 300 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 8 251 - -
Mupr486g00006 300 CDD BRCT 103 178 - -
Mupr486g00006 300 Gene3D BRCT domain 34 94 IPR036420 -
Mupr486g00006 300 SUPERFAMILY BRCT domain 191 251 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr486g00006 Mupr-Chr486 19955 28470 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr486g00006 1 251 Core DNA Replication Machinery Family AT1G77320 64.312 1.29e-114 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr486g00006 K10728 - gmx:100804966 461.07