Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr486g00002 ATGGATAATCCAGTAGGAACACCAGTAGAGGTTGGACTCAGTTTAAAGAAGGAAACTGATGAAGAACAAGTTGATCCCACTCATTACAGAAGCATAGTTAGGTGCTTGAGGTATTTGTGTAACACAAGGCTTGACTTAAATTTCAATGTTGGGCTAGTCAGTAGGTTCATGCAAGAGCCAAGAAAGTCTCACTTGTTAGTTGCAAAGAGAATATTGAGGTATGTGCAGGGGACGGTTGATTTTGGAATCCTATTACCAAAGGGAGAAGTTGTTGTAGAACTAGAATTGGTTGGGTATTCTGATTCAAACTGGTGTGGAGACAAGCAGGATAGAAAAGCATTGCAGGGAGCTCTGATTTCTTGGTCCTCTACAAAGGAACTTGTAGTAGCATTGTCATCCTGTGAGTTTGAGTATATTGCAGCCTCTGAAATAGCTTGTCAAGCAATGTGGCTAGATGCTTTGTTGGGAGAATTATTTGAAGAAGACAACAAATCTGTCATTGATCTAGCTAGGCATCCAGCATCTCACCGGAGGAGCAAACATATAGAAACAAGGTTCTATTTCTTAAGAGAACAAGTCAGCAGTAAGAAACTGAAAATAGAGCATTGTAGAACTGAAATTCAGTTTGCAAACATATTCACTAAAGCCTTGAAGTGGGAAAAGTTTAGGTGTTTGAGAGATTCTATTGGAATTAATGGAGTTGTTGCCATTGATCAATTTTTACCAAAAGAAGTCACTGCTCAAGACCAAGAGACAGGAATTTGCACTGTGAGTCAATTTCCTACCCAGGCTGTTCAAATGATAAGTGACATGCCCTCTCAGTTTTCAAGTCAATCACAAACTTTGAGAAGCATGGAAAATAAAAATGTTGGTTGTGGAGTTGATAATCATGAGACCAATTTTAAGTTACCAAGTATTTATAGCAAAAAGGCAAGGCTTGTGGAGGAACCTTGCCTATCCAATAAGATTCCTTTGGCATCAAATTCAGGTATTCATGCCTATGACAAGAATTTTTCCGCAGACAATGTGCTTATAGATTCTGGGGAGGTTTCTCATGCCGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATGCATGATCAGAGGTCCCCAGCGCAGACAGGGTGTGAGAGAAGTATTTACCCATCTGATCGAACAGTCCTTGGTGAAGATAATTCCAATCCTCATGCTGTCTTTGGATTATCTAAACACTGGTTAAACAGAAAAGATGATAATGGGGATGCTTCTCAAGAGCGAAGAGCAGGAATATATGATGGTTTTAGTGAAACACAGACAGAATCTCAGGTTGTTAGTTACGAAGAAGATTTATCAGGAAGGCAAATGCTTATAGATAGAGTCAGAACTCGA 1386 0.3975 MDNPVGTPVEVGLSLKKETDEEQVDPTHYRSIVRCLRYLCNTRLDLNFNVGLVSRFMQEPRKSHLLVAKRILRYVQGTVDFGILLPKGEVVVELELVGYSDSNWCGDKQDRKALQGALISWSSTKELVVALSSCEFEYIAASEIACQAMWLDALLGELFEEDNKSVIDLARHPASHRRSKHIETRFYFLREQVSSKKLKIEHCRTEIQFANIFTKALKWEKFRCLRDSIGINGVVAIDQFLPKEVTAQDQETGICTVSQFPTQAVQMISDMPSQFSSQSQTLRSMENKNVGCGVDNHETNFKLPSIYSKKARLVEEPCLSNKIPLASNSGIHAYDKNFSADNVLIDSGEVSHAVPDVAAAIEDLLEQTSKMHDQRSPAQTGCERSIYPSDRTVLGEDNSNPHAVFGLSKHWLNRKDDNGDASQERRAGIYDGFSETQTESQVVSYEEDLSGRQMLIDRVRTR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr486g00002 462 CDD RNase_HI_RT_Ty1 97 217 - -
Mupr486g00002 462 PANTHER GAG-POL-RELATED RETROTRANSPOSON 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr486g00002 Mupr-Chr486 2829 7203 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr486g00002 199 462 Core DNA Replication Machinery Family AT1G77320 36.452 2.36e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr486g00002 K10728 - gmx:100804966 326.635