LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4864g00001	ATGATGCTTCCCAGTGCAAAAGGTGTGTTGCTTTTTCTTGTTTGTTTTTCTGTTTTGTTGCATGGAATGCATGCTGCATGGAATGAGCAGCCAGGGTCTTTGATCTTGGGTTGTGGGTTGGATGAAGGGGGTGCCAATGATGTTGCTGGAAGACAATGGAGTCCTGATGATAAGTTCCTTGGGGCAGAAGCTCATTCAATCACATTCAAAGCCTCTTACCAAGATCCTTCCCTTACGTCTGAGGTTCCGTACATGTCAGCACGACTTTTCACCTCCGAGACACCATACAAATTCCCCGTTCAACCTGATAAGCGCTATTGGCTCAGGCTACACTTCTATCCCTCTCTTTATGGCAGTTTCAATCCCTCTGACTCATTTTTCTCCGTGACTGCAAATGGGGTTACCCTCCTCGCCAATTTCAGCGCCTCAACCACTTGTGAGGCCCTCTCACAAGCTTACATTGATAGGGAGTACTCCCTTGCACCTTTGAGTTCAGATACCTTGACTCTCACTTTCAAGCCTTCCCATGGATCATTCGCTTATGTCAATGGCATTCAGTTGATCCAAATGCCCAAGTTGTTTGATTCTGCAGTATTGGTAGGGTATGACGACCAAACAATGGATGTCAAGAGCTTGAATTTGCAAACCATGTTTAGACTAAACGTTGGTGGACAGTACATATCTCCAACCCAAGACTCTGGCCTTACAAGAATGTGGTATGATGACACACCTTACCTTTATGGTGCAGCCACTGGTGTGACCAACCAAGCTACCAAGAATGTCCGAATCAACTATCAAACCATGCCGCAGTACATTGCTCCTGTTGATGTCTACTCCACATCAAGATCAATGGGGAATGACAAGGATGTCAACATGGGCTTCAACCTCACGTGGATTTTCCAAGTTGATCCAAATTCCATGTACCTCGCAAGGTTGCATTTCTGTGATTACTATTACTCCAGAGTCAATGAAATTGTTTTCAACATCTTTGTCAACAACCAAACGGCACAAGCTGAGGCTGATGTGATTGGGTGGACAGGAGGTAAGGGAGTGCCCACTTATAAGGACTATGCGATATATGTCCAAGATGGGGAGGGTGATGAGATGCTTTGGCTTGCTCTTCACCCTGCACCTGACACGAAGCCTGAGTACTATGATGCCATACTCAATGGGGTGGAGATATTCAAGCTCAATGACACAGACTTGTCTGGTCCCAATCCTCAGCTTTCAAAGATGCTTCTCAAGCAGCAAGAGGAGGAGGAAAATGGTTTCAGTAACCGCAAACCATATCAAAGACATATTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTGTTGCTTTTATGGCTGCAGTATGTGTAGCTGTGTACAGGAAGAAGAAGAAAGCTCCAAGGTCAGAGGGCCAGACAAGCTGGCTCCCCATCTATTTGAGCTCACACTACAGCAAATCCTCATCGTCTGGGAAGAGCATCAACAGTTCAAATTTGTCCACCATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTGCAAGAGATAAAGAATGCAACCAAGAGTTTTGATGAGTCCAACGTCATTGGGGTTGGTGGGTTTGGAAAGGTGTACAAGGGTGTCATTGATAATGGAATGAAGGTGGCAATCAAGAGGTCGAATCCGCAGTCAGAACAAGGAGTTAATGAGTTCCAAACAGAAATAGAAATGCTCTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGATTCTGCGAGGAAAATAATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAGCATCTTTACAAGGGCAACAAGCCTCTGTCTACTCTATCATGGAAGCAAAGGTTGGAGATCTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACTGGGGCTAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGGCTGCCAAGGTTTCAGATTTTGGCTTGTCAAAAACGGGTGAAAATATGAACGAAGGTCATGTTAGTACTGTGGTGAAGGGTAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGACAGCAATTGACTGAAAAATCTGATGTATACTCATTTGGGGTTGTTCTGTTTGAAGCATTATGTGCCAGGCCTGTTCTCAATTCTAATCTTCCAAAGGAGCAAGTTAGTCTTGCTGAATGGGCATTGATTTGCAAGCAAAAGGGAACTATAGAGGATATTATTGACCCGTGTCTCAAAGGAAAGATTAATCCAGAAAGCTTGAAAAAGTTTGTAGACACGGCTGAAAAATGCTTGTCTGATCATGGTACTGATCGTCCCTCCATGAATGATCTCTTGTGGAATCTCGAATTTGCTCTCAACCTGCAAAATAATGTTGAAGGTGGTTCAACTCACTCTGCCTGTGTTGAGGAAAGTGAGTTTGAAGATGTAAGCTTGGGAAACAGTGACATGACAAAACAATATAAAAACCCGAGCCTTGGGAGTGAGCATGACCTTAGCAACGATTCCAGTGAGAATCAGACTGAAATCTTCTCACAACTTGGGAAACAGCTTCGTTCATTCATGGAATTCAAGGAAATAAAACCGGCTATTCTGCGTTGGTTCAAATTGACTTGTAATGCGTGCGAAAACGCTGTACAAAATATAGAAAGAATTGTTCGGACAACAGTAATGCCACCATCTCTTTCTTCAAAAGAGATGTGTAAATTACAATTCTGCGTTATTTCATGTCATCATGTGGCTGTTGAGGGAGATAAGGCCCCTCTTCCCCCAAAGCTATATCTTCCGTTGAGACCGGCGATGCTTTCAGGGGGGTTTCCTTTGCATGGACATGAAATGAATTTTCTGTTACCAGATGAGAGACCTTCAAGAACACCATGGACTACTTGGCAAGTTCGTAAGCTTGGCCTTCATTCATCTTTTTTTCTGACCCCAAACCAGGGAATTGTCCAATATCATGGCCCTCCAGAGGTTGAAACTCATGATTTAAACCAACGGCAAACTCTCCAGGGTCAGTTCCAGGGCCTTGGAAATAGTCTGCAACCTAACCTAGCAGCCAATCACCACATATCCCAGCCCTTCCAAAAGGATCAAAGATGCAAGGAACTCCAGCAGTGCTCAGAAAGGTCCAACAGTGAGCACCACCACTCTGGGAAATCAGTAGTTTCTTGGTATTATTGGCCATCCATGACACTGAATCAACTCCTCTCACAAAAGCTCCTTCAAAAGGAACTTCTATGCTTCCTGGAAAAGGAAGAGGATCCTCAAAGGCTGCTAGAAGGGCCCATATTGAACTCAACTCCAACCTCTTAA	3339	0.4453	MMLPSAKGVLLFLVCFSVLLHGMHAAWNEQPGSLILGCGLDEGGANDVAGRQWSPDDKFLGAEAHSITFKASYQDPSLTSEVPYMSARLFTSETPYKFPVQPDKRYWLRLHFYPSLYGSFNPSDSFFSVTANGVTLLANFSASTTCEALSQAYIDREYSLAPLSSDTLTLTFKPSHGSFAYVNGIQLIQMPKLFDSAVLVGYDDQTMDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAATGVTNQATKNVRINYQTMPQYIAPVDVYSTSRSMGNDKDVNMGFNLTWIFQVDPNSMYLARLHFCDYYYSRVNEIVFNIFVNNQTAQAEADVIGWTGGKGVPTYKDYAIYVQDGEGDEMLWLALHPAPDTKPEYYDAILNGVEIFKLNDTDLSGPNPQLSKMLLKQQEEEENGFSNRKPYQRHIVIGGAAGGAAGVAFMAAVCVAVYRKKKKAPRSEGQTSWLPIYLSSHYSKSSSSGKSINSSNLSTMAQGLCRYFSLQEIKNATKSFDESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENNEMCLVYDYMALGTMREHLYKGNKPLSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWAAKVSDFGLSKTGENMNEGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNSNLPKEQVSLAEWALICKQKGTIEDIIDPCLKGKINPESLKKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQNNVEGGSTHSACVEESEFEDVSLGNSDMTKQYKNPSLGSEHDLSNDSSENQTEIFSQLGKQLRSFMEFKEIKPAILRWFKLTCNACENAVQNIERIVRTTVMPPSLSSKEMCKLQFCVISCHHVAVEGDKAPLPPKLYLPLRPAMLSGGFPLHGHEMNFLLPDERPSRTPWTTWQVRKLGLHSSFFLTPNQGIVQYHGPPEVETHDLNQRQTLQGQFQGLGNSLQPNLAANHHISQPFQKDQRCKELQQCSERSNSEHHHSGKSVVSWYYWPSMTLNQLLSQKLLQKELLCFLEKEEDPQRLLEGPILNSTPTS	1112

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4864g00001	1112	SUPERFAMILY	Protein kinase-like (PK-like)	493	794	IPR011009	-
	Mupr4864g00001	1112	MobiDBLite	consensus disorder prediction	822	848	-	-
	Mupr4864g00001	1112	Pfam	Malectin-like domain	37	396	IPR024788	-
	Mupr4864g00001	1112	CDD	STKc_IRAK	525	792	-	-
	Mupr4864g00001	1112	Pfam	Protein tyrosine and serine/threonine kinase	523	788	IPR001245	GO:0004672\|GO:0006468
	Mupr4864g00001	1112	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	641	653	IPR008271	GO:0004672\|GO:0006468
	Mupr4864g00001	1112	FunFam	Receptor-like protein kinase FERONIA	595	809	-	-
	Mupr4864g00001	1112	FunFam	FERONIA receptor-like kinase	33	191	-	-
	Mupr4864g00001	1112	PANTHER	OS07G0166700 PROTEIN	503	798	IPR045272	GO:0004714\|GO:0006468
	Mupr4864g00001	1112	FunFam	FERONIA receptor-like kinase	212	398	-	-
	Mupr4864g00001	1112	Gene3D	Transferase(Phosphotransferase) domain 1	595	811	-	-
	Mupr4864g00001	1112	ProSitePatterns	Protein kinases ATP-binding region signature.	525	547	IPR017441	GO:0005524
	Mupr4864g00001	1112	Gene3D	-	212	398	-	-
	Mupr4864g00001	1112	Gene3D	-	36	191	-	-
	Mupr4864g00001	1112	ProSiteProfiles	Protein kinase domain profile.	519	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4864g00001	1112	SMART	serkin_6	519	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr4864g00001	1112	Gene3D	Phosphorylase Kinase; domain 1	478	594	-	-
	Mupr4864g00001	1112	FunFam	receptor-like protein kinase FERONIA	481	594	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4864g00001	Mupr-Chr4864	5516	10594	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4864g00001	34	802	Receptor kinase-like Gene Family	AT3G51550	54.329	0.0	826

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mupr4864g00001		Malectin_like	8.6e-36	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4864g00001	-		-	gmx:102659961	1446.03