Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4860g00002 ATGGGACAGAAAATAGAAGCACAAGATGAAGAGAAGAAACAATACAAGGCCAAAGTCGACGAAAAAGTTCCATTTTACAAGCTTTTTACCTTTGCAGACCACCTTGACATGACTCTGATGATTATTGGTTTCATCTGTGCCATTGCTAATGGGTTGGCACAGCCTCTTATGACTCTCATTTTTGGGAGACTCATCAACATCTTTGGCACCACCGATAAATCCCACATTGTCAGGGAAGTTTCTAAGCCTTGCATGGCTTGTCCATTTGAGGTAGCATGTTGGATGGTGACTGGAGAAAGACAAGCAGCAAGGATCCGTGGCCTGTACTTGAAAACTATATTGAAACAAGACATTACCTTCTTTGACACTGAAACAACAGCTGGAGAGGTAATTGGGAGAATGTCTGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATACAACTTGTTACTTCCTTTTTGGGTGGCTTTGTTATTGCCTTTTCAAAAGGATGGGAACTCTGTCTAGTTTTGCTTGCATGCATTCCTTGTATTGTTGTTATTGGTGGAATTATGTCCATGATGATGGCGAAAATGTCAACTCGCGGGCAAGCTGCTTATGCAGAAGCCGGAAATGTTGTAGAACAAACAGTTGGAGCCATTAGAACAGTTGCCTCTTTTACTGGTGAGAAAAAAGCAATAGAAAAATATAATAACAAGTTAAGAATTGCTTACAATACAACTGTTCAACAAGGGTTGGCCTCAGGGTTTGGAATGGGAGTACTTTTGTTGATTGTGTTTTCCACCTATGCACTTGCCATGTGGTATGGTTCCAAGCTGATCGTTGAGAAAGGCTATGATGGTGGAAGTGTCTTCAATATAATCATATCAATCAATACTGGTGGAATGTCACTAGGTCAGGCAACCCCATGCGTAAATGCTTTTGCAGCAGGCCAAGCAGCAGCATATAAGATGTTTGAGACAATTAAACGAAAGCCAAAAATTGATGCTTATGACACCAATGGTGTTGTCTTGGAAGAGATAAAGGGAGATATTGAACTCAAGGATGTTTGCTTCAGATACCCTGCAAGGCCAGATGTTCTGATCTTTTCTGGATTCTCATTCTTTATTCCAAGTGGCACAACTGCTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTCTACTATAATCAGTTTATTAGAAAGATTTTATGACCCTGAGTCTGGTGAAGTACTTATAGATGGTGTGAATTTGAAGAATTTTCAAGTTAGATGGATAAGAGAACAGATTGGGCTTGTTGGTCAAGAACCTGTCCTGTTCACAGCTAGTATTAAAGAGAACATAGCATATGGAAAAGAAGGCGCAACAGATGAGGAGATAACAACAGCAATAACACTTGCCAATGCCAAAAAGTTCATTGATAAGCTTCCTGAGGGCATTGACACAATGATAGGAGGGCATGGAACTCAACTTTCTGGTGGGCAAAAGCAAAGAATTGCAATTGCAAGGGCAATTTTGAAGAACCCTAGAATCCTTCTTCTTGATGAAGCTACTAGTGCATTGGATGCTGAGTCTGAACGTATTGTTCAAGAAGCATTAGAGAAAGTTATGACGCAAAGGACTACTGTGGTTGTTGCACATCGTTTGACAACTATTAGACATGCTGACACAATAGCAGTGGTTCATCAGGGCAAAATTGTGGAAAAAGGAACTCATGATGAGTTAGTGAAGAATGCTGAGGGTGCTTATTCTCAGCTTATTCGTTTACAAGAAGGAAATAAAGCAGCAGAAGAGAGCCTTAAGGTAGAAGAAGATAAGTCAAATAAGGACAGTTCCAACTTAGAGAGTCACATGACTAGATCTTCCACTCAGAGAGCATCCTTATCCATTGCAAGATCAATAAGTCGAGGCTCATCTGGCAGTAGACACTCTCTCTCACTTGGCTTTGCTCTTCCTCAAATTCCTATGCATGAGTCTGGAGAACAAGATGATAGGGATGTTGAAAGTAGTGAAATCGATAATGCGAAGCGCCAAAAGGTTCCTATTAACCGTTTGGCCAAGTTGAACAAACCAGAGCTTCCTGTCTTACTACTAGGATCCCTTGCTGCAGCAATACATGGTGTTACTCTCCCTGTATTTGGCCTCTTGCTTTCATCAGCTGTTGACTCTTTCTATAAACCTCCACATCAGCTTAGGAAAGATTCTGAGTTTTGGTCACTTCTATTTGTTTGTTTGGGACTTGTTGCTCTGGTGTCTATACCAGTGGAAAACTACTTATTTGGGATAGCTGGTGGAAAACTCATAGAACGAATTCGTTCAATGACATTTAACAAGGTTGTGCACCAAGAAATCAGTTGGTTCGATCATCCTTCAAATTCAAGTCATCTAACTCAAAGAAATGAATTGCCATGCAGTGGTTCAGTTAGTGCAAGGTTGGCAACTGATGCTTCATCTGTGAGAAGTCTTGTGGGTGACACCTTGGCCCTCATTGCAGTAAACATTGCAACAATCACAGCAGGTCTAATTATAGCATTCACTGCTAATTGGATTCTGGCTTTTGTAATTTTGGCTGTGTCACCCATGTTGATTATACAAGGATACCTTCAGACCAAGTTCGTAAATGGATTCAGTGAAGATGCAAAGACAAAGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTGGTAGCATTAGAACTGTTGCATCATTTTGTGCTGAACCAAAGGTGATGGACATGTACAGGAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCGGTTGGGGCTTGTTAGTGGTGCAGGATTTGGTTTCTCTTTTACTGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGTTCTATTCTCGTGCAACACGGGAAAGCAACTTTTGGAGAGGTTTTCAAGGTTTTCTTTGCCTTGACAGTTACAGCAGTTGGTGTTTCCCAGAGTAGTGCCTTGGCACCAGATACTAACAAGGCCAAAGATTCTGCAGCTTCAATATTTGAAATTCTTGACAGCCAACCAGCGATTGACTCGAGCAGTGATGAGGGCGCAACATTAGACACTGTAAAAGGTGACATTGAACTTCAAAATGTCAGCTTTTGTTACCCAACAAGGCCTAATATTCAAATTTTCAAGGACTTTTGTCTAACCATGCCAGCTGGGAAGACCGTTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTGATAAGTCTCCTAGAGAGATTTTACAACCCTAATTCTGGACATTTACTGGTTGATGGAGTGGATATAAAAAAGTTGAGACTAAGCTGGCTGAGGCAGCAAATGGGATTGGTTGGTCAAGAGCCTATTCTTTTCAATGATAGCATTCGAGCAAACATAGCTTATAGCAAAGAGGGAGGAGCCGCAGAAGAAGAGATAATTGCAGCTGCAGAAGCAGCAAATGCACACAAGTTCATAAGTTCTCTTCCACATGGCTATGACACTTCTGTTGGGGAAAGAGGTACACAATTGTCAGGAGGACAAAAGCAGCGCATAGCCATTGCAAGAGCCATTCTGAAAGACCCCAGAATCCTTTTGCTAGACGAGGCAACTAGTGCACTTGATGCAGAATCAGAGCGTGTAGTTCAAGAGGCTTTAGATAGAGTTAGTGTTAATAGAACTACCGTTGTGGTAGCTCACCGTCTTGCAACAATTAAAGGTGCTGACATTATAGCAGTTGTGAAAAATGGGGTGGTTGCTGAAAAGGGACGACATGAGGAGCTGATGAAGATTGATGGTGGAGTTTATGCTTCTTTGGTTGCTCTCCATATGACTACGTAG 3813 0.4167 MGQKIEAQDEEKKQYKAKVDEKVPFYKLFTFADHLDMTLMIIGFICAIANGLAQPLMTLIFGRLINIFGTTDKSHIVREVSKPCMACPFEVACWMVTGERQAARIRGLYLKTILKQDITFFDTETTAGEVIGRMSGDTILIQDAMGEKVGKFIQLVTSFLGGFVIAFSKGWELCLVLLACIPCIVVIGGIMSMMMAKMSTRGQAAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNNKLRIAYNTTVQQGLASGFGMGVLLLIVFSTYALAMWYGSKLIVEKGYDGGSVFNIIISINTGGMSLGQATPCVNAFAAGQAAAYKMFETIKRKPKIDAYDTNGVVLEEIKGDIELKDVCFRYPARPDVLIFSGFSFFIPSGTTAALVGQSGSGKSTIISLLERFYDPESGEVLIDGVNLKNFQVRWIREQIGLVGQEPVLFTASIKENIAYGKEGATDEEITTAITLANAKKFIDKLPEGIDTMIGGHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALEKVMTQRTTVVVAHRLTTIRHADTIAVVHQGKIVEKGTHDELVKNAEGAYSQLIRLQEGNKAAEESLKVEEDKSNKDSSNLESHMTRSSTQRASLSIARSISRGSSGSRHSLSLGFALPQIPMHESGEQDDRDVESSEIDNAKRQKVPINRLAKLNKPELPVLLLGSLAAAIHGVTLPVFGLLLSSAVDSFYKPPHQLRKDSEFWSLLFVCLGLVALVSIPVENYLFGIAGGKLIERIRSMTFNKVVHQEISWFDHPSNSSHLTQRNELPCSGSVSARLATDASSVRSLVGDTLALIAVNIATITAGLIIAFTANWILAFVILAVSPMLIIQGYLQTKFVNGFSEDAKTKYEEASQVANDAVGSIRTVASFCAEPKVMDMYRKKCSGPEKQGVRLGLVSGAGFGFSFTALYCTNAFCFYIGSILVQHGKATFGEVFKVFFALTVTAVGVSQSSALAPDTNKAKDSAASIFEILDSQPAIDSSSDEGATLDTVKGDIELQNVSFCYPTRPNIQIFKDFCLTMPAGKTVALVGESGSGKSTVISLLERFYNPNSGHLLVDGVDIKKLRLSWLRQQMGLVGQEPILFNDSIRANIAYSKEGGAAEEEIIAAAEAANAHKFISSLPHGYDTSVGERGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVSVNRTTVVVAHRLATIKGADIIAVVKNGVVAEKGRHEELMKIDGGVYASLVALHMTT 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4860g00002 1270 ProSitePatterns ABC transporters family signature. 1168 1182 IPR017871 GO:0005524|GO:0016887
Mupr4860g00002 1270 FunFam ABC transporter B family member 9 27 347 - -
Mupr4860g00002 1270 MobiDBLite consensus disorder prediction 596 612 - -
Mupr4860g00002 1270 SUPERFAMILY ABC transporter transmembrane region 22 335 IPR036640 GO:0005524|GO:0016020
Mupr4860g00002 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 589 IPR027417 -
Mupr4860g00002 1270 SMART AAA_5 378 564 IPR003593 GO:0016887
Mupr4860g00002 1270 SMART AAA_5 1055 1248 IPR003593 GO:0016887
Mupr4860g00002 1270 Pfam ABC transporter 1047 1196 IPR003439 GO:0005524
Mupr4860g00002 1270 Pfam ABC transporter transmembrane region 40 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4860g00002 1270 Pfam ABC transporter transmembrane region 696 978 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4860g00002 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1028 1265 IPR003439 GO:0005524
Mupr4860g00002 1270 PANTHER ABC TRANSPORTER B FAMILY 4 594 IPR039421 -
Mupr4860g00002 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1018 1266 IPR027417 -
Mupr4860g00002 1270 Coils Coil 585 605 - -
Mupr4860g00002 1270 FunFam ABC transporter B family member 1 1018 1268 - -
Mupr4860g00002 1270 CDD ABC_MTABC3_MDL1_MDL2 351 589 - -
Mupr4860g00002 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 316 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4860g00002 1270 CDD ABC_MTABC3_MDL1_MDL2 1028 1264 - -
Mupr4860g00002 1270 Gene3D - 349 616 IPR027417 -
Mupr4860g00002 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 696 993 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4860g00002 1270 FunFam ABC transporter B family member 1 675 994 - -
Mupr4860g00002 1270 CDD ABC_6TM_Pgp_ABCB1_D2_like 685 1011 - -
Mupr4860g00002 1270 ProSitePatterns ABC transporters family signature. 490 504 IPR017871 GO:0005524|GO:0016887
Mupr4860g00002 1270 Gene3D ABC transporter type 1, transmembrane domain 3 83 IPR036640 GO:0005524|GO:0016020
Mupr4860g00002 1270 FunFam ABC transporter B family member 1 341 590 - -
Mupr4860g00002 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 351 587 IPR003439 GO:0005524
Mupr4860g00002 1270 Gene3D - 1018 1270 IPR027417 -
Mupr4860g00002 1270 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 312 - -
Mupr4860g00002 1270 Gene3D ABC transporter type 1, transmembrane domain 89 1002 IPR036640 GO:0005524|GO:0016020
Mupr4860g00002 1270 SUPERFAMILY ABC transporter transmembrane region 683 1012 IPR036640 GO:0005524|GO:0016020
Mupr4860g00002 1270 MobiDBLite consensus disorder prediction 613 641 - -
Mupr4860g00002 1270 Pfam ABC transporter 371 518 IPR003439 GO:0005524
Mupr4860g00002 1270 MobiDBLite consensus disorder prediction 596 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4860g00002 Mupr-Chr4860 8997 14449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4860g00002 10 1270 Calmodulin-binding Proteins AT2G36910 43.634 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4860g00002 K05658 - gmx:100792531 2079.29