Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr485g00001 AAGACGTGTTACGCATCAGCTGGCAATATAGAGTATCAGTTTTCTCCATCTCGTGATCACATACATACATACACTTGCACGTGCACCAAGAGAAAGAGATCGAGATCGATGGGAAGAAGTCCTTGTTGCTCTAAGGAGGGATTGAACAAAGGAGCATGGACAGCTTTGGAAGACAAAATTCTGTCAGAATACATTCACATTCATGGCGAAGGAAAATGGAGACACCTGCCCAAAAGAGCAGGTCTTAAGAGATGCGGGAAAAGTTGCAGGCTAAGATGGTTGAATTATCTACGACCCGGCATTAAAAGAGGTAACATTACCAATGATGAAGAGGAGCTTATAATCAGGCTTCACAAGCTTCTTGGAAACAGGTGGTCCTTGATTGCTGGACGGCTTCCGGGACGAACAGATAATGAAATAAAAAATTATTGGAACACCAACATTGGAAGGAAACTTCAAAATGGTTCCCCAGGTTACTCCTCCATTACAAGTGGTGGTGCACCAAACACAGTTCAACAAGATCGAAGCCTTAAAAACCAAGAGCGTCACTATCCTTATTCACCAAATAATTCGTGTCTTGTTCAGACTAAAGCAACAAGGTGGGCTAAGGTCACGGCCACTAAAGACATTATTAGTCAACACAATGAAGGGATTATTAATAGCAATAATGTTGGTGATAACAAAATGAAGACATTTTCAGTGTCTCCATCTTCAGAGAGTAACAACGATCCAGTATTGGATTTCATGGAAGATCTTGAGATGGATGGAAATTTCTTCTCGGAGCTCCTCAAGATGGATTTACCCGAATCATCTTGCCAGGAACATAAGATACTAGTGGAAGAGAATGGTAACCCTAGCACAGTTAACAAAGGTTATTTATCTCCAAAATCATCCAGTGATACCACCCACTTCCTTTGGGGTGATTCATTGTATGATACAAATTTTGATTTTCTACCCGTGGCATCTTTTATCGAGTCCGGATTTGATTGGCTC 993 0.4129 KTCYASAGNIEYQFSPSRDHIHTYTCTCTKRKRSRSMGRSPCCSKEGLNKGAWTALEDKILSEYIHIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITNDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGSPGYSSITSGGAPNTVQQDRSLKNQERHYPYSPNNSCLVQTKATRWAKVTATKDIISQHNEGIINSNNVGDNKMKTFSVSPSSESNNDPVLDFMEDLEMDGNFFSELLKMDLPESSCQEHKILVEENGNPSTVNKGYLSPKSSSDTTHFLWGDSLYDTNFDFLPVASFIESGFDWL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr485g00001 331 CDD SANT 52 97 IPR001005 -
Mupr485g00001 331 CDD SANT 107 148 IPR001005 -
Mupr485g00001 331 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
Mupr485g00001 331 Gene3D - 50 102 - -
Mupr485g00001 331 Pfam Myb-like DNA-binding domain 50 97 IPR001005 -
Mupr485g00001 331 Pfam Myb-like DNA-binding domain 103 146 IPR001005 -
Mupr485g00001 331 MobiDBLite consensus disorder prediction 155 175 - -
Mupr485g00001 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 152 IPR017930 -
Mupr485g00001 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 97 IPR017930 -
Mupr485g00001 331 FunFam MYB-related transcription factor 49 102 - -
Mupr485g00001 331 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
Mupr485g00001 331 SMART sant 102 150 IPR001005 -
Mupr485g00001 331 SMART sant 49 99 IPR001005 -
Mupr485g00001 331 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 37 254 - -
Mupr485g00001 331 Gene3D - 106 183 - -
Mupr485g00001 331 ProSiteProfiles Myb-like domain profile. 45 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr485g00001 Mupr-Chr485 3273 5337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr485g00001 37 152 MYB Transcription Factor Family AT2G16720 75.862 5.95e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr485g00001 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr485g00001 K09422 - gmx:100809225 465.692