Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4848g00002 ATGGAGAGTGACACAAACACCCCTACTTCCTCACCCACATTTTCTCACTCTTCTAATTCCCCTTCTTCCCCTCCCCTAGTTGTCATGAGCCCTTGTGCTGCTTGCAAGATTCTGAGGCGAAGATGTGCTGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTGAACCTGCCAAGTTTACCACTGCACATCGAGTCTTCGGTGCAAGCAACATCATCAAGTTCTTACAGGAACTTCCAGAGTCTCAGAGATCTGACGCAGTGGCCAGCATGGTTTATGAGGCTGGTGCAAGAATAAGAGACCCGGTGTACGGATGTGCAGGTGCAATTTGCCAGCTCCAAACGCAGGTGAATGAACTTCAAGCACAATTAGCGAAGGCACAAGCTGATCTTGTGAACATGCAATTCCAACAAGCCAATCTCGTGGCTCTAATTTGCATGGAAATGGCACAAACTCCACAGGAATCACCACAACAATCCGTAGACAACTTCTTTTCAAGTCCTTCCCACAGCAGCGGCTATCAAAACAATCTCAATTTCTTTGAGGAGAACTCCAATAACCTAAACTCTTTGTGGGAGCCTCTTTGGACATGA 594 0.4714 MESDTNTPTSSPTFSHSSNSPSSPPLVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRSDAVASMVYEAGARIRDPVYGCAGAICQLQTQVNELQAQLAKAQADLVNMQFQQANLVALICMEMAQTPQESPQQSVDNFFSSPSHSSGYQNNLNFFEENSNNLNSLWEPLWT 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4848g00002 197 Pfam Lateral organ boundaries (LOB) domain 31 128 IPR004883 -
Mupr4848g00002 197 Coils Coil 110 137 - -
Mupr4848g00002 197 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Mupr4848g00002 197 MobiDBLite consensus disorder prediction 1 25 - -
Mupr4848g00002 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4848g00002 Mupr-Chr4848 18376 19823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4848g00002 2 197 AS2 family AT1G07900 63.636 9.63e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr4848g00002 LOB 4.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4848g00002 - - gmx:100819336 301.212