Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr483g00003 ATGGTCATGTCCCTTCTCAATTCAATCCCATTCCCCCATATCCAAAAGGTTGAATCACTTCTTTTTTGTGCTATGACATCATCACACAATTTTGGAGCTTATCCCTTTGAAACCTCTAGCACCTCTGCCACCTCCGAAGGCATTTTTCGTAAACCTTGTGTTGAACAAGAGAAAGATGAAGAGGTCACAATGAAGGAGAAGGGTGTCAAATCTGAACTAGATCATCAATCTTCCAATTCCCATATGGTGTTGGATTTTTATAAGCTCTCTGAGAATGAATCAATTCGTAGGTCGAAAGTGGAATTAGATTTTTTCAACTTGACGGGGGTTTCATCTTTTTGTAGGGCTAATAACATTGAAAGGAGAGGTGGGAACAACAATGAGGAGAAATCATCAAAGGCTAAGACCTTTTTTTGCAACTTTTGCAAGAAAGAGTTTTCATCTTCACAAGCTTTGGGAGGGCACCAAAACGCCCACAAGAAAGAGCGTGCTCTTGCAAAACATCGCCAAGGGATTGATGTTAGTGCTTTTGGGTACCCTCATTTTCTTTATTATCCTTATCCCTCGCACTCCTTTTATGGAGCTTATAATAAGCCACTTGGGGTTCGAATGGAATCTATGATTCACAAGTCATCATATCCTTCTTCCTCACTTGGTTTTAGGTTTGGTAAAGGGTGGTCAAGACAAGAGATGCTAAACCTTTCTCTTGATAGAGTAAGGATGGAGGGTTTGCATACAAATAATGGAATTAGGATGCTAGACAGTGATACAACTTTAAGGACTGGAGATGATTGTGGTATTATTGGAGACATACCCTTCCTTAGAGATTCTTCTACAAATGTTGCTACCAAATTAATCTCAACCCTAGATTGGCCAACATTTACTTCCATGGGCGGTGATCATTCCAAACAAGAAGAAACTTCCAGTTCTGATTCTTGTGGGATTGAGTTATCACTTAAACTTTAA 966 0.3965 MVMSLLNSIPFPHIQKVESLLFCAMTSSHNFGAYPFETSSTSATSEGIFRKPCVEQEKDEEVTMKEKGVKSELDHQSSNSHMVLDFYKLSENESIRRSKVELDFFNLTGVSSFCRANNIERRGGNNNEEKSSKAKTFFCNFCKKEFSSSQALGGHQNAHKKERALAKHRQGIDVSAFGYPHFLYYPYPSHSFYGAYNKPLGVRMESMIHKSSYPSSSLGFRFGKGWSRQEMLNLSLDRVRMEGLHTNNGIRMLDSDTTLRTGDDCGIIGDIPFLRDSSTNVATKLISTLDWPTFTSMGGDHSKQEETSSSDSCGIELSLKL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr483g00003 321 MobiDBLite consensus disorder prediction 297 317 - -
Mupr483g00003 321 SUPERFAMILY beta-beta-alpha zinc fingers 134 164 IPR036236 -
Mupr483g00003 321 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 36 251 IPR044246 GO:0009788
Mupr483g00003 321 Gene3D Classic Zinc Finger 115 175 - -
Mupr483g00003 321 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 164 IPR013087 -
Mupr483g00003 321 ProSitePatterns Zinc finger C2H2 type domain signature. 139 159 IPR013087 -
Mupr483g00003 321 Pfam C2H2-type zinc finger 138 162 - -
Mupr483g00003 321 MobiDBLite consensus disorder prediction 297 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr483g00003 Mupr-Chr483 28035 29000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr483g00003 126 228 C2H2 Transcription Factor Family AT5G25160 46.789 9.31e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr483g00003 zf-C2H2_6 2.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr483g00003 - - gmx:102661483 369.777