Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr483g00002 ATGAGGAAGAAGCTCGACACCCGTTTCCCCGCTGTAATTATCAAATTTTCGTCTCTGCGTGTTGCTCTGATGTTTCGCGTCTCGGAAAACCGTGCAAAGGTGGTGTTATCTGGCTCGACAGGAATGCCTCTAGTGGACTTTGGCCTCGTAGCTGACAGAGATACCAATCACCATATTTCAAAAACACAGAAGGGGAAGGGGTCGGGAAACAATAATTTGCAGGCTCGGATAAAGAAGATAATGCAAGCAGACGAGGATGTCGGAAAGATAGCATTGGCAGTTCCTGTTTTATCAGCACTTGGCTGCAGCTGGTCTTTTCCCTCATATATTGTTGTCACTCATGAATTTTTTACAGCTAAAGCTCTGGAGTTATTTTTGCAAGATCTTTGTGACCGCACTTATGAAATAACACTTCAGAGAGGAGCAAAGACCATGAATGCATTGCATTTGAAACATTGTGTACAAAGTTATAATGTCTTTGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATGGGCATGGACATGGCCATGGCCATTCTGAGGCTGGAGCTGATGATCGTGCACTTTCAAAGAGAAGGAAAGCTGCTGGTGATGAGGGCAATGACAGTGATGAAGAGGCAAAGAGGAGTAAGATGCGTGAGTTGGGCCACACCGGCACTACTGGCAGGGGAAGAGGGCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAACAGTTGAAAGAGATATCTGTCATCAGCAGGTCGAATCTGACGTAAAATCAGAATCCGAGCCTTGCACCTCTATTCAGCAAAGTAGCAATGATATACCTAATACAAGTGTGCCAATAGACAACGGTCCGCAATCCAAGGAGTTATCAAAGGAGAACTTTGCAGTTACTGAGGAAAGTAGTCAATCTTTCCGTGACATTGATCTGAATGCCAACTTAAACGAAAACGAAGACAAAAATGTTAGCACAGCTGTTCAGGCTGAGCCTGCCGCCGACATGGATATTAAACATGAAGAAATTCCAGGCTGGTCCCTCTCTGATGTGGACAAGATGGCCATTGACACTATGCAGCTTGCAAACCTTGGTAGTCGACTAGAAGAGGACGAGGAAGATTATGACGAGGAAGGGATGTCAGCTACATTTAAAAGATGA 1149 0.4569 MRKKLDTRFPAVIIKFSSLRVALMFRVSENRAKVVLSGSTGMPLVDFGLVADRDTNHHISKTQKGKGSGNNNLQARIKKIMQADEDVGKIALAVPVLSALGCSWSFPSYIVVTHEFFTAKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHGHSEAGADDRALSKRRKAAGDEGNDSDEEAKRSKMRELGHTGTTGRGRGRGRGRGRGRGARTVERDICHQQVESDVKSESEPCTSIQQSSNDIPNTSVPIDNGPQSKELSKENFAVTEESSQSFRDIDLNANLNENEDKNVSTAVQAEPAADMDIKHEEIPGWSLSDVDKMAIDTMQLANLGSRLEEDEEDYDEEGMSATFKR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr483g00002 382 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 72 203 - -
Mupr483g00002 382 MobiDBLite consensus disorder prediction 256 287 - -
Mupr483g00002 382 MobiDBLite consensus disorder prediction 360 382 - -
Mupr483g00002 382 MobiDBLite consensus disorder prediction 236 255 - -
Mupr483g00002 382 MobiDBLite consensus disorder prediction 174 222 - -
Mupr483g00002 382 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 117 154 IPR003958 -
Mupr483g00002 382 SUPERFAMILY Histone-fold 116 170 IPR009072 GO:0046982
Mupr483g00002 382 MobiDBLite consensus disorder prediction 174 287 - -
Mupr483g00002 382 Gene3D Histone, subunit A 60 169 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr483g00002 Mupr-Chr483 7201 12210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr483g00002 75 364 CCAAT-HAP5 Transcription Factor Family AT3G12480 44.966 2.84e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr483g00002 K21752 - gmx:100810093 436.417