Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4823g00001 ATGGAAAGTGAAAAGTCTAATGTTTCAAAGGCTGAAGAACTTAAACTCCTTGCCAATGAAGCATTTGCTGCTAGAAAATATTCCCAAGCAATTGATCTATATACACAAGCAATTGAGCTGAACAGTCAAAATGCAGTTTACTTTTCTAATCGTGCCTTTGCCCATCTTCGCCTTGAGGAATATGGTAGTGCAATACAAGATGCCACAAAGGCTATTGACATAGATCCTAAATATTCGAAGGGTTATTACAGGCGAGGTGCTGCTCATCTTGGGCTGGGAAAATTCAAGGAAGCACTGAAAGATTTTCAGCAGGTCAAGAAAATGTGTCCAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAGGCAGTTATGAAACTTAAATTTGAAGAAGCAATTGCTACACCAGAGTCTGAAAAGCGTTCAATAGCTGAATCCATAGATTTCCATACAATAGGAAAGGGCCGCAATTCTTCGGTGCCAACCGAAGTGGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGCGGCGGTGATGTTGTTCAGGACATCAAAGACCACAATAGTAGTTGCAATTGTGGTTGGTTTGCTGTTGCTCCTTGGGGCTTGTTGGTGGAGTGGCCACAATACTGATGTCGAGCCACAATATTCGGGAGCAAGAATAGAGGGGGATGTTGTTACTTTGGATTTTGTGAAAAAAATGATGGAAGATTTCAAGAACCAGAAGTTCTTACATAAACGGTATGCATTCCAGATTGTATTGCAAGCAAGGGAAATGTTGCAAGCTTTGCCTTCTCTTGTTGACATACATGTTCCTGATGGCAAACATTTTACTGTCTGTGGTGATGTGCATGGTCAGGTAATTGGTTTATTATAA 882 0.4093 MESEKSNVSKAEELKLLANEAFAARKYSQAIDLYTQAIELNSQNAVYFSNRAFAHLRLEEYGSAIQDATKAIDIDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAIATPESEKRSIAESIDFHTIGKGRNSSVPTEVAIAAVTVAVMAAAVMLFRTSKTTIVVAIVVGLLLLLGACWWSGHNTDVEPQYSGARIEGDVVTLDFVKKMMEDFKNQKFLHKRYAFQIVLQAREMLQALPSLVDIHVPDGKHFTVCGDVHGQVIGLL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4823g00001 293 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 43 292 - -
Mupr4823g00001 293 Gene3D - 206 293 IPR029052 -
Mupr4823g00001 293 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Mupr4823g00001 293 Pfam Tetratricopeptide repeat 80 112 IPR001440 GO:0005515
Mupr4823g00001 293 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Mupr4823g00001 293 SUPERFAMILY TPR-like 7 137 IPR011990 GO:0005515
Mupr4823g00001 293 Gene3D Tetratricopeptide repeat domain 2 160 IPR011990 GO:0005515
Mupr4823g00001 293 Pfam PPP5 TPR repeat region 211 270 IPR013235 -
Mupr4823g00001 293 Pfam Tetratricopeptide repeat 17 78 - -
Mupr4823g00001 293 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Mupr4823g00001 293 SMART tpr_5 11 44 IPR019734 GO:0005515
Mupr4823g00001 293 SMART tpr_5 79 112 IPR019734 GO:0005515
Mupr4823g00001 293 SMART tpr_5 45 78 IPR019734 GO:0005515
Mupr4823g00001 293 SUPERFAMILY Metallo-dependent phosphatases 224 291 IPR029052 -
Mupr4823g00001 293 FunFam Serine/threonine-protein phosphatase 5 1 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4823g00001 11 104 U-box Gene Family AT3G07370 32.979 1.16e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4823g00001 K04460 - gmx:100820099 513.457