Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr481g00001 ATGGCGCTTGATTTGAATCAAGAGCATTTGGTTCGAATAGAAGAGCGTATTAGATGCTTAGAAGCAGTGGTTTTCAGAGCTAGGCAACGTCAAAGGCAGGAATCGAGTCATAATCCAATTCAGATAACCAATTTTGCAGGAGAATTGATAGCAACAGGTAATGTTCAAGGTGAAGGTAGGGTGAACCAAGAAGGGGTTAGTATTGTTGAAGGAGAAATTGTGGAAGGTGGGCAAGTTGGTAAAAGGAAGGGTACCTATTTGATTGCTAAAGCATTGGAGGTGGAAACATATAGTAATGAGGGTGAGTGTTATGCTGGAAATTTTTTTGATTGTAACATATGCTTGGACATGGCAAGACATCCAATTTTAACTTGTTGTGGTCACTTGTTTTGTTGGCCATGCTTTTACAAGTTGTCATATGCATATTCAAATGCAAAGGAATGTCCAGTTTGCAAAGGAGAGGTAACTGAAGAAGGCATTATCCCTATTTATGGAAATGCAAGTGTTGATAGTAGTGACCAGTTCGACTTGAATGAAACTAGTTTGAGAGTTCCTGCTCGACCACCTGCACGTCGAATTGAAATTCACTAG 591 0.3993 MALDLNQEHLVRIEERIRCLEAVVFRARQRQRQESSHNPIQITNFAGELIATGNVQGEGRVNQEGVSIVEGEIVEGGQVGKRKGTYLIAKALEVETYSNEGECYAGNFFDCNICLDMARHPILTCCGHLFCWPCFYKLSYAYSNAKECPVCKGEVTEEGIIPIYGNASVDSSDQFDLNETSLRVPARPPARRIEIH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr481g00001 196 ProSiteProfiles Zinc finger RING-type profile. 111 152 IPR001841 -
Mupr481g00001 196 Pfam Zinc finger, C3HC4 type (RING finger) 110 156 - -
Mupr481g00001 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 185 IPR013083 -
Mupr481g00001 196 SUPERFAMILY RING/U-box 107 165 - -
Mupr481g00001 196 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 78 192 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mupr481g00001 196 SMART ring_2 111 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr481g00001 Mupr-Chr481 1399 2785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr481g00001 84 194 C3H Transcription Factor Family AT3G58030 50.450 4.63e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr481g00001 - - lang:109334311 249.98