Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4818g00001 ATGAAGTATTTTTCTCTCATGTTACTTGCAGTGTGCTCTATATATGTCCATCTATTTTTTCTTTTTACATTAAACTCAACGTGCTTTAGATCAAATATGATTGTTTTTGCATCAGGAAATGAAACTGATCATTTGGCATTGCTCAAATTCAAAGAATCTATATCTAGTGACCCAAATGGAATTTTTCTCTCTTGGAATACTTCTATTCACTTCTGTAACTGGCATGGAATTACATGCAATCCCATGCTTCAAAGAGTTACAGGTTTAAACTTGCAAGGATACAAGTTGAAGGGATCCATATCTCCTCATGTTGGCAATCTTTCTTATATGAGAAGCTTCAACCTCACAAACAACAACTTCTACGGGAAAGTCCCACAGGAGTTGGGACGGTTGTCACAACTGCAACAACTCTCTATCGGAAATAACTCATTGGTAGGAGAAATTCCTACAAACTTGACAGGTTGTACTCATCTCAAAATGTTAGATTTAGGTGGGAACAATTTGATTGGCAAAATACCAATCGAAATTGGCTCACTTCGAAAGCTTCAACATTTGAGAGTTTATAATAATGAGTTAACCGGAGGAATCCCATCATTCATAGGGAATCTTTCATCTCTAAGTGATCTCTCGGTGTCTATTAACAACTTAGAGGGAAATATTCCACAAGAAATATGTCTTCTCAAAAGCTTGACATTTATATCATTTGGTGTCAACAAACTAGCAGGTACAATTCCTTCTTGTCTTTATAATATATCATCTCTTACTATAATCATAGCTGCAGTAAATCAATTCAATGGCTCTCTTCCACCCAACATGTTCCATACCCTCCCCAATCTCCAAGTACTTGGAATTGGTGAGAACCAAATCTCAGGCCCAATCCCACCTTCCATCACAAATGCATCTATCCTTTCAAGACTTGATATCCGTGTAAACCATTTCACAGGACAAGTTCCAAGTCTGGGGAAGCTTCAAGAACTTTACATCCTATCTTTGGGTCATAACAATCTAGGTGACAATTCAACAAATGATTTGAACTTTTTTAAATCATTAACAAATTGTAGTAAGTTGCAATTGATATCTATATCCTCCAATAATTTTGGAGGTCGTTTGCCAAATTCCTTGGGAAATTTAACCACTGAGTTCAGTCAACTATATCTTGGAGGTAATCAAATAACAGGAGAAATCCCTACAACAATAGGAAATCTAATTGGTTTAACTCTCTTGACGATGGAAAATAATCACATTGATGGGATTATACCAACAACTTTTGGGAAGTTTCAAAAAATGCAAAAGTTAGAATTAAGTGAAAATATGCTGTCAGGAAATATTGGAGCATTCATAGGAAACCTTAGTCAATTGTTTTATTTGGGTTTGGGAGGAAATAAGTTAGAAGGAAATATTCCTCCAAGTATAGGAAAATGCCAAAAGTTACAATACTTAAACCTTTCACAAAACAACCTTAGAGGAACCGTGCCATTAAATATTTTTAACATTTTCTCTCTAACAAACTTGTTGGATTTGTCACAAAACTTATTGAGTGGTAGTATACCAAAAGAAGTGGGCAACCTAAAAAATCTGGACTTGTTAGATTTGTCTGGGAATCATTTGTCTGGTGATATTCCTAAAACCATTGAAGAATGCATAATGTTGGAGTACCTCTATTTGCAAAGGAATTATTTAGAAGGAATCATACCATCCTCTTTGGCATCACTCAAAGGGCTTCGAGGCTTAGACCTCTCACAAAATCATTTGTATGGATTAATTCCTAATTCTCTCCAGAACATTTCTTCCTTGGAATATTTCAACGTATCTTTCAATATGTTGGATGGTGAGGTGCCAACTGAAGGTGTTTTTCGAAATGCAAGTGAGTTTGTGGTGATTGGAAATAGTAAGCTTTGTGGAGGTATTTCAGAACTACATCTACCACCATGTCCTATCAAAGCTAAGAAACTTGCAAAACACCACAGGTCCAAGTTGATAGTAATGATAGTTAGTGTGGTTGTTTTTCTTGTCATACTATCATTTATTCTAACTATCTATTGGATGAGGAAAAGGAGTAAAAAATCATCTTTGGATTCACCAACAATTGACCAACTGGATAAAGTTTCATACCAAAGTTTGCACATTGGAACTGATGGGTTCTCAACTACAAACTTGATAGGGTCTGGAAATTTTAGCTCTGTTTACAAAGGAACTCTTGGGCTTGAAGACAAAGTTGTTGCCATAAAGGTCCTAAACCTTAAAATAAAAGGAGCTCACAAGAGTTTCATTACTGAATGCAATGCTCTTAAAAGTATTAAACATCGAAACCTGGTTCAGATTTTAACATGTTGTTCGAGCACAGATTACAAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACTTGAAAAATGGAAGCTTAGAGCAATGGCTATATCCAAGGACACTAAGTGCAAAACATCCTAGAACATTGAATCTTGATCAAAGATTAAATATCATGATTGATGTTGCTTATGCATTACATTATCTTCATTATGAATGTGAGCAGTCGATCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCACATGTGAGTGATTTTGGCATAGCAAGAATTCTTTCAACCATCAATGGTATCACTTCTAAGCAAACAAGCACAATTGAAATAAAGGGGACTGTCGGCTATGCTCCTCCGGAGTATGGAATGAATTTTGAGGTGTCTATGAATGGCGACGTGTACAGTTTTGGAATTCTTATGTTAGAAATGCTTACTGGAAGAAGACCCACAGATGAAATCTTTGAAAATAGTCAAAATTTGCATAACTTTGTGGAAAATTCAATTCCTAGTAATCTTTTACAGATTTTGGATCCATCACTTATACAAAAACATGAAGAAGCAACAATAGAAGAAGAAAACAATCAAAATCTTACTCCAACAGTTGAAAAATGCCTAGTTTCACTCTTTAATATTGGACTTGCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAATATGATGGATGTCATCAGAGAGCTAAATAAAGTCATACAAGTCTTTACTTCTCTAAGGGCTAAATAG 3081 0.3531 MKYFSLMLLAVCSIYVHLFFLFTLNSTCFRSNMIVFASGNETDHLALLKFKESISSDPNGIFLSWNTSIHFCNWHGITCNPMLQRVTGLNLQGYKLKGSISPHVGNLSYMRSFNLTNNNFYGKVPQELGRLSQLQQLSIGNNSLVGEIPTNLTGCTHLKMLDLGGNNLIGKIPIEIGSLRKLQHLRVYNNELTGGIPSFIGNLSSLSDLSVSINNLEGNIPQEICLLKSLTFISFGVNKLAGTIPSCLYNISSLTIIIAAVNQFNGSLPPNMFHTLPNLQVLGIGENQISGPIPPSITNASILSRLDIRVNHFTGQVPSLGKLQELYILSLGHNNLGDNSTNDLNFFKSLTNCSKLQLISISSNNFGGRLPNSLGNLTTEFSQLYLGGNQITGEIPTTIGNLIGLTLLTMENNHIDGIIPTTFGKFQKMQKLELSENMLSGNIGAFIGNLSQLFYLGLGGNKLEGNIPPSIGKCQKLQYLNLSQNNLRGTVPLNIFNIFSLTNLLDLSQNLLSGSIPKEVGNLKNLDLLDLSGNHLSGDIPKTIEECIMLEYLYLQRNYLEGIIPSSLASLKGLRGLDLSQNHLYGLIPNSLQNISSLEYFNVSFNMLDGEVPTEGVFRNASEFVVIGNSKLCGGISELHLPPCPIKAKKLAKHHRSKLIVMIVSVVVFLVILSFILTIYWMRKRSKKSSLDSPTIDQLDKVSYQSLHIGTDGFSTTNLIGSGNFSSVYKGTLGLEDKVVAIKVLNLKIKGAHKSFITECNALKSIKHRNLVQILTCCSSTDYKGQEFKALIFEYLKNGSLEQWLYPRTLSAKHPRTLNLDQRLNIMIDVAYALHYLHYECEQSIIHCDLKPSNVLLDDDMVAHVSDFGIARILSTINGITSKQTSTIEIKGTVGYAPPEYGMNFEVSMNGDVYSFGILMLEMLTGRRPTDEIFENSQNLHNFVENSIPSNLLQILDPSLIQKHEEATIEEENNQNLTPTVEKCLVSLFNIGLACSVESPKERMNMMDVIRELNKVIQVFTSLRAK 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4818g00001 1026 SMART serkin_6 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4818g00001 1026 PRINTS Leucine-rich repeat signature 523 536 - -
Mupr4818g00001 1026 PRINTS Leucine-rich repeat signature 477 490 - -
Mupr4818g00001 1026 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Mupr4818g00001 1026 FunFam LRR receptor-like serine/threonine-protein kinase EFR 346 650 - -
Mupr4818g00001 1026 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 81 345 - -
Mupr4818g00001 1026 Gene3D Transferase(Phosphotransferase) domain 1 796 1022 - -
Mupr4818g00001 1026 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 795 - -
Mupr4818g00001 1026 ProSiteProfiles Protein kinase domain profile. 714 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4818g00001 1026 SUPERFAMILY L domain-like 40 336 - -
Mupr4818g00001 1026 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Mupr4818g00001 1026 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Mupr4818g00001 1026 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Mupr4818g00001 1026 Gene3D Ribonuclease Inhibitor 446 652 IPR032675 -
Mupr4818g00001 1026 Pfam Protein kinase domain 716 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4818g00001 1026 Gene3D Ribonuclease Inhibitor 382 445 IPR032675 -
Mupr4818g00001 1026 Gene3D Ribonuclease Inhibitor 319 381 IPR032675 -
Mupr4818g00001 1026 Gene3D Ribonuclease Inhibitor 39 318 IPR032675 -
Mupr4818g00001 1026 SUPERFAMILY Protein kinase-like (PK-like) 688 1013 IPR011009 -
Mupr4818g00001 1026 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 1014 - -
Mupr4818g00001 1026 SUPERFAMILY L domain-like 383 634 - -
Mupr4818g00001 1026 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1026 - -
Mupr4818g00001 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Mupr4818g00001 1026 SMART LRR_typ_2 523 547 IPR003591 -
Mupr4818g00001 1026 SMART LRR_typ_2 179 203 IPR003591 -
Mupr4818g00001 1026 SMART LRR_typ_2 450 474 IPR003591 -
Mupr4818g00001 1026 SMART LRR_typ_2 131 155 IPR003591 -
Mupr4818g00001 1026 SMART LRR_typ_2 276 300 IPR003591 -
Mupr4818g00001 1026 SMART LRR_typ_2 402 425 IPR003591 -
Mupr4818g00001 1026 SMART LRR_typ_2 571 594 IPR003591 -
Mupr4818g00001 1026 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4818g00001 Mupr-Chr4818 1308 5204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4818g00001 40 1020 Receptor kinase-like Gene Family AT3G47570 44.657 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mupr4818g00001 Pkinase 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4818g00001 - - gmx:100801459 1558.12