Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4812g00008 ATGGAGACCAAGACCCTATGTGGTCCTCACTCATTCTCTCATATCCTATTTACCCTCCTGGCCTTCTTCTGGATCTCTGTGGAACTTATGGACACAAGCAGGTCTGAGGGAAAGAGGGTTCTGAGGTACAAAGAGGAAGATGATGAGGGTGAAGAAGAAGAAGAGGAAGAGGTGAGTGAGATGGGTTTTGGAGAAGATGGAAGGAGGAATAAGAGAGTAATGACAGATCTCTATGGAAAGAGAGGGTCCAAAGGTGGAGGCTCAATGGCACCTTCTTGTCAGGTGGATAATTGTGATGCTGATCTAAGTGAAGCAAAGCTGTATCACAGAAGACACAAGGTTTGTGAGTACCATGCCAAGGCTCCTTCCGTACACATGGCAGGGCTGCAACAAAGGTTTTGCCAACAATGTAGCAGATTCCATGAGCTATCACAATTTGATGACTCAAAAAGGAGTTGTAGAACGCGGTTGGCTGGGCATAACGAGAGGCGTCGCAAAAATGCAGTTGACAACCATGGAGAATGA 525 0.4648 METKTLCGPHSFSHILFTLLAFFWISVELMDTSRSEGKRVLRYKEEDDEGEEEEEEEVSEMGFGEDGRRNKRVMTDLYGKRGSKGGGSMAPSCQVDNCDADLSEAKLYHRRHKVCEYHAKAPSVHMAGLQQRFCQQCSRFHELSQFDDSKRSCRTRLAGHNERRRKNAVDNHGE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4812g00008 174 MobiDBLite consensus disorder prediction 42 66 - -
Mupr4812g00008 174 Gene3D - 83 154 IPR036893 GO:0003677|GO:0005634
Mupr4812g00008 174 ProSiteProfiles Zinc finger SBP-type profile. 90 167 IPR004333 GO:0003677
Mupr4812g00008 174 MobiDBLite consensus disorder prediction 47 61 - -
Mupr4812g00008 174 Pfam SBP domain 93 166 IPR004333 GO:0003677
Mupr4812g00008 174 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 66 168 IPR044817 GO:0003677
Mupr4812g00008 174 FunFam Squamosa promoter-binding-like protein 14 84 154 - -
Mupr4812g00008 174 SUPERFAMILY SBT domain 91 170 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4812g00008 Mupr-Chr4812 27856 29631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4812g00008 77 168 SBP-box Gene Family AT1G53160 68.478 1.01e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr4812g00008 SBP 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4812g00008 - - gmx:100527199 244.588