Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4811g00004 ATGAAGTATTTTTTTCTCATTTTATTTCCAGTTTCGTCTATTTATGTTCACATGTTATCCCTCTTTACATTAAACTCACTGTGGTTTGTCCCAAACACAATTGTCTTTGCATTAGACAATGGGTCTGATCATTTGGCATTGCTAAAATTCAAAGAGTCCATATCCATCGACTCAAATGGAATTTTGCTCTCTTGGAATAGTTCTGCACATTTTTGTAACTGGCATGGAATTACATGCAATCTCATGCTTCAAAGAGTTACAAAGCTGAACTTGCAAGGATACATGTTGAGCGGATCCATATCTCCTCACATTTGCAATCTCTCTTACTTGAGAAACTTCAACCTCGCAGACAACAATTTCTATGGGAAAATTCCACAAGAAATGGGTCGATTGTCGCAATTGCAACAACTCTCTTTCGCAAATAACTCATTGAGTGGAGAAATTCCTACAAATTTGACAGGTTGCAATAATCTCAAAAGTTTGCTCTTATATGGGAACATATTGGTCGGCAAAATACCGATTGAAATTGGTTCATTTCGAAAACTTCAACTTTTGGGACTTTTTTTGAACCAGTTAACTGGAAGAATCCCATCATTCATAGGGAATCTTTCATCCTTAACTCATCTTTCAGTGGGTTCAAACAAGTTAGAGGGAGATATTCCACAAGAAATATGTCGTCTCAAAAGCTTAACATTCTTAGTATTGGGTGGCAACAAATTTGGAACACTGCCTTCTTGTCTTTATAATATGTCATCTCTTACTCTAATTGCAGCTCCACAAATTCAATTTAATGGCTCTCTTCCACCCAACATGTTTCACACCCTTCGCAATCTCCAAGAACTTGACATTGGTGACAATCAAATCTCAGGTTCAATTCCACCTTCCATCATAAATGCATCTACTCTTTCAATACTTGACATCAGTCAAAACTATTTCACTGGACAAGTTCCAAGTCTTGAGATGCTACAAGTTCTTAAATATCTATCTTTGTCTAATAATAGTCTAGGTGACAATTCAACTAATCATTTGGGGTTTTTAAAATCGTTGACAAATTGTAGTGAGTTGCAAATGTTAGATATATCCTATAATAACTTTCATGGTCAATTGCCAAATTCTATTGGGAATTTATCCACCAAACTCAGTCAACTATATCTTGGAGGTAATCAAATATCAGGAGAAATTCCTACAGGAATAGGAAATCTAATTGGCTTAACTCTGTTGAGCATGAGAGATAACCGCATTGTTGGAATTATCCCAACAACTTTTGGGAAGTTTCAAAAGATGCAATTGTTAGATTTAAGTGAAAACATGCTATCAGGAGAGATAGGAGTCCACATAGGAAACCTTAGTCAATTGTTTCATTTGAGTATGGCAAAAAATATGTTAGAAGGAAATATTCCTCCAAGTATAGAAAAGTGTTTAAAGATACAATACTTAAACCTTGCACAAAACAACCTTACAGGAACCATACCACTAGGGGTTTTTAATCTTTCATCTCTAACAAACTTGCTGACTTTATCAAGAAACTCATTGAGTGGTAGTATACCGAAAGAAGTGGGCAACCTAAAAAATATCAACTTTGTAGATGTATCTGAGAATCATCTGTCTAGTCACATTCCTGAAACTATTGGGGAATGCACAATGTTGGAGTACCTCTATTTGCAAGGGAATTCTTTACAAGGAACCATACCATCCTCTTTTGCATCACTCAAAAGTCTTCAACGATTAGACCTATCACGAAATCACTTGTCTGGATCGATTCCTATTGCTTTGCAAAACATCTCTTTCCTAAAATATTTCAATGTGTCTTTTAACATGTTGGATGGTGAGGTACCAACTAAAGGTGTCTTTCAAAATGCAAGTGAGTTAGGGGTGATTGGAAATAGTAAGCTTTGTGGTGGTATTTCAGAATTGCATCTACCACCATGCCCTGTCAAAGGTAAGAAACATGCAAAGCACCACAAGTTTATGTTGATAGCAGTGATAGTTATTGTGGTTGTTTTTCTTCTCATATTGTCAATCATTCTAACTATCCACTGGATGAGGAAAAGAAGTAAGAAACCATCTTTGGATTCACCAATAGTTGACCAGCTGGCTAAAGTTTCATACCAAAGCCTACACAATGGAACTAATGGGTTCTCAATTACAAACTTGATAGGGTCTGGAAATTTTAGCTCTGTCTACAAAGGAATTCTTGAGTTTGAAGACAAAGTTGTTGCCATAAAGGTGCTAAACCTTAAAAAAAAGGGAGCTCACAAGAGTTTCGTTGCTGAATGTAATGCACTTAAAAGTATTAAACATCGAAATCTAGTTCAAATTTTAACATGTTGTTCTGGAATAGATTACAAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACATGAAAAATGGAAGCTTAGAGCAATGGCTGCATCCGAGGACACTAAATGTAGAGCATCCAGGAACATTGAACCTCGATCAAAGATTAAATATCATGATTGATGTTGCTTCAGCATTACATTATCTTCATCATGAATGTGAACAACCAATCATTCATTGTGATTTAAAGCCAAGTAATATCCTTCTTGATGACAACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAAACTTCTTTCATCCATTAACGGTACCACTTCTAAGCAAACAAGTACAATTGGGATAAGGGGCACAGTTGGCTATGTTCCTCCAGAGTATGGGATAGGTTCTGATGTGTCTACGAACGGCGATATGTACAGCTTTGGAATTCTTATGTTGGAAATGCTTACTGGAAGAAGACCTACAGATGAATTATTTGAAAATGGTCAAAATTTGCATCACTTTGTAGAAAATTCATTTCCTTGTAATTTGTTACAGATTTTGGATCCATCACTTGTACCAAAACGAGACGAAGCAACAACGGAAGAAGACTATCAAAATCTTACTTCAATGGTTGAAAAGTGCTTAGTTTCACTCTTTAAAATTGGACTTGCTTGTTTGGTGGAATTACCAAATGAAAGAATGAACATGGTGGATGTCACTAGAGAGTTAAGCAAGATTAAAAAAACCTTCCTTATTGAAATTGGAGACTTGCAATTCCACAACCGTCGATTGCATCAAATAGGGTGTTCTGTAAATGCCCGAGCACGGATCCTCTCCGCGAAAACAAAGGTGCTAGAAGCTAAAGAAAGTGCCAGTGCCCTGAAATCAGCAGCATGCATGGGATATTGTCCTACAAAACTTCAAGCACAA 3234 0.3636 MKYFFLILFPVSSIYVHMLSLFTLNSLWFVPNTIVFALDNGSDHLALLKFKESISIDSNGILLSWNSSAHFCNWHGITCNLMLQRVTKLNLQGYMLSGSISPHICNLSYLRNFNLADNNFYGKIPQEMGRLSQLQQLSFANNSLSGEIPTNLTGCNNLKSLLLYGNILVGKIPIEIGSFRKLQLLGLFLNQLTGRIPSFIGNLSSLTHLSVGSNKLEGDIPQEICRLKSLTFLVLGGNKFGTLPSCLYNMSSLTLIAAPQIQFNGSLPPNMFHTLRNLQELDIGDNQISGSIPPSIINASTLSILDISQNYFTGQVPSLEMLQVLKYLSLSNNSLGDNSTNHLGFLKSLTNCSELQMLDISYNNFHGQLPNSIGNLSTKLSQLYLGGNQISGEIPTGIGNLIGLTLLSMRDNRIVGIIPTTFGKFQKMQLLDLSENMLSGEIGVHIGNLSQLFHLSMAKNMLEGNIPPSIEKCLKIQYLNLAQNNLTGTIPLGVFNLSSLTNLLTLSRNSLSGSIPKEVGNLKNINFVDVSENHLSSHIPETIGECTMLEYLYLQGNSLQGTIPSSFASLKSLQRLDLSRNHLSGSIPIALQNISFLKYFNVSFNMLDGEVPTKGVFQNASELGVIGNSKLCGGISELHLPPCPVKGKKHAKHHKFMLIAVIVIVVVFLLILSIILTIHWMRKRSKKPSLDSPIVDQLAKVSYQSLHNGTNGFSITNLIGSGNFSSVYKGILEFEDKVVAIKVLNLKKKGAHKSFVAECNALKSIKHRNLVQILTCCSGIDYKGQEFKALIFEYMKNGSLEQWLHPRTLNVEHPGTLNLDQRLNIMIDVASALHYLHHECEQPIIHCDLKPSNILLDDNMIAHVSDFGIAKLLSSINGTTSKQTSTIGIRGTVGYVPPEYGIGSDVSTNGDMYSFGILMLEMLTGRRPTDELFENGQNLHHFVENSFPCNLLQILDPSLVPKRDEATTEEDYQNLTSMVEKCLVSLFKIGLACLVELPNERMNMVDVTRELSKIKKTFLIEIGDLQFHNRRLHQIGCSVNARARILSAKTKVLEAKESASALKSAACMGYCPTKLQAQ 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4811g00004 1078 SMART serkin_6 713 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4811g00004 1078 SUPERFAMILY Protein kinase-like (PK-like) 686 1011 IPR011009 -
Mupr4811g00004 1078 Gene3D Ribonuclease Inhibitor 42 156 IPR032675 -
Mupr4811g00004 1078 Gene3D Phosphorylase Kinase; domain 1 694 794 - -
Mupr4811g00004 1078 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 794 - -
Mupr4811g00004 1078 SMART LRR_typ_2 275 299 IPR003591 -
Mupr4811g00004 1078 SMART LRR_typ_2 401 424 IPR003591 -
Mupr4811g00004 1078 SMART LRR_typ_2 522 546 IPR003591 -
Mupr4811g00004 1078 SMART LRR_typ_2 131 155 IPR003591 -
Mupr4811g00004 1078 SMART LRR_typ_2 570 593 IPR003591 -
Mupr4811g00004 1078 SMART LRR_typ_2 203 225 IPR003591 -
Mupr4811g00004 1078 SMART LRR_typ_2 227 250 IPR003591 -
Mupr4811g00004 1078 Gene3D Transferase(Phosphotransferase) domain 1 795 1024 - -
Mupr4811g00004 1078 SUPERFAMILY L domain-like 378 633 - -
Mupr4811g00004 1078 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Mupr4811g00004 1078 CDD STKc_IRAK 719 1014 - -
Mupr4811g00004 1078 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Mupr4811g00004 1078 FunFam LRR receptor-like serine/threonine-protein kinase EFR 345 649 - -
Mupr4811g00004 1078 Pfam Leucine rich repeat 180 240 IPR001611 GO:0005515
Mupr4811g00004 1078 Pfam Leucine rich repeat 403 462 IPR001611 GO:0005515
Mupr4811g00004 1078 Pfam Leucine rich repeat 549 607 IPR001611 GO:0005515
Mupr4811g00004 1078 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1022 - -
Mupr4811g00004 1078 ProSiteProfiles Protein kinase domain profile. 713 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4811g00004 1078 Gene3D Ribonuclease Inhibitor 167 263 IPR032675 -
Mupr4811g00004 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Mupr4811g00004 1078 Pfam Leucine Rich repeat 275 290 IPR001611 GO:0005515
Mupr4811g00004 1078 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 344 - -
Mupr4811g00004 1078 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 1012 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 425 451 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 322 354 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 203 218 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 570 596 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 275 301 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 131 154 - -
Mupr4811g00004 1078 SMART LRR_sd22_2 377 403 - -
Mupr4811g00004 1078 Pfam Protein kinase domain 715 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4811g00004 1078 Gene3D Ribonuclease Inhibitor 264 644 IPR032675 -
Mupr4811g00004 1078 SUPERFAMILY L domain-like 42 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4811g00004 Mupr-Chr4811 31641 37008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4811g00004 42 1019 Receptor kinase-like Gene Family AT3G47570 44.545 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mupr4811g00004 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4811g00004 - - gmx:100801459 1484.54