Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4809g00001 ATGGAAGATTTTTGGAGCATGATTTGTGGGGATTCTGTTTGTTCAATGACTGTAGGAAAGCTTTTCTGTTACGAATTCATGTTTTTGAAAGATCCTTCTGCATGCATCAACCATTTATTGATCATTTGCTTTGATGTGTTACTATTGTTCATGCTGTCATTCGCTATGATTCATAAGTCTTTGTCAAGACCATGTCGTGGTCTAATCCGAGTGGAAAGATATTCAAACTTGCAACTATGTTCTGCCATAACCAGTGCTTCTCTTGGGGTGTTGCATTTGTGCTTAGGCATTTGGGTTTTAGAGGAGAAGTTAAGGAAAAACCACACTGCTTTTCCCCTTGACTGGTGGTTACTAGAACTCTTTCAGGGATTCACATGGTTGTTCATAGGTCTAACTGTAAGCCTTCGGCTGAAACAACTTTCAACAGTATGGTTATGGCTGTTCTCTATACTTACATTCTTTGTTTATGGTATTTTCTGTGTTCTATCCATGTCTTATTCAATTAGAAACAAAGAACTATCCTTCAAGGTAGCTTTAGAAGTTCTATCTTTTCCTGGATCTTTTTTACTACTCTTATGCACATATAGAGTATGTAAATATGAACACACTAACAGAGAAACTAATGAAGGCCTTTATGCCCCTTTAACTGGCCAGTTCAATGAAGTTGATCCTATTAGGTGTGTAACCCCATTTGCCAACGCTGGATTCTGTAGTAGAATGTTGTTTTCGTGGTTGAATCCACATATGAGAAAGGGTAAAGAGAAAACACTTGAGGATGAGGATATCCCAAAGCTGCGGGAGTTAGATCGAGCAGAAAGTTGTTATTTGTCGTTTGAAGAACAATTGATGAAACAGATAGAAAAAGATCCATCATCACATGTATCAATTTTGAGGATATTAATTTTGTGCCATCAAAAAGAGATTTTGGTATCAGGATTCTTTGCATTGATTAAGGTACTGGCTCTGTCTTCTGGTCCTCTATTTCTAAATGCTTTCATGTTGGTTGCTGAGGGTAATGAAGGCTTTAAATATGAGGGTTATGTATTGGTCATATCACTTCTCATTATAAAGATCATAGAGTCTGTATCACAAAGGCAATGGTATTTCCGCAGTAGACTTGTTGGGATGAAAGTTAGGTCACTGCTTACTGCAGCAATTTATAAAAAATTGTTGAGGTTGTCCAATGTTGCTAGATTGACACACTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAGTTTCCATTTTGGTTTCACCAAACATGGACAACAATCCTCCAAATAGGTATTGCATTAGTAATGCTTTTTCGTGCCATTGGGATGGCCACAATCGCCTCATTGGTGGTGATAGTTCTCACTGTGCTATGCAATACTCCAATAGCGAAGTTGCAACACAAGTTTCACAGTGAACTTATGGTGGCACAAGATGAGAGATTGAAAGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTTCTAAAGCTATATGCATGGGAAAACCATTTTAAAAATGCTATAGAAAGGCTAAGAAATGTGGAACTAAAATTGTTAGGTGCAGTGCAATTGAGAAAGGCATACAACGTATTTCTATTTTGGGCCTCACCTGTTTTGGTCTCTGCTGCTTCCTTTGGGGTATGTTACTTCCTGAAAATTCCTCTGCATGCAAATAATGTTTTCACTTTTGTGGCAGCTTTACGGATTGTGCAAGAGCCAATTACAACCATCCCGGATGTTATCGGAGTGGTCATTCAAGCAAAGGTTGCATTCACTCGGATTATTAAGTTCCTTGAGGCACCAGAACTACAAAGTAAAAATTTTAGGAACAAGTGTTTTGTTAACAATCTCAATGACTCTATTTTAATCAGACATGCCGATTTTTCATGGGAAGATAGTGTATTAAAACCAACATTGAGGAACATAAATTTGGAGGTTAGACATGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTATCACTGATTCTTGGAGAAGTTCCTATTACAAAAGGAACTATTGAAGTTTATGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATACAAACAGGTACTATACAGGAAAATATTTTGTTTGGATCTGATTTGGATGTTAAAAGATATGAAGAAACACTTCATAGATCTTCGCTAGTGAAGGACCTGCAGTTGTTTCCCAATGGTGACCTAACTGAAATAGGTGAGAGAGGAGTTAACCTAAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGTGCTCTTTATCAGAATGCTGATGTATATCTCTTGGATGATCCATTCAGTAAAGATGGCTTTGATACTCGGCAGGAATACATCATGGAAGGACTTAAAGAGAAAACTGTCTTACTTGTAACTCATCAAGTTGACTTCCTCCCAGCATTTGATTCTGTTTTGTTAATGTCAGACGGGGAAATCCTTGAAGCTGCTCCTTATCATTGTCTATTGAGCTCGAGCAAAGAATTCCAGAACCTCATCAATGCTCATAAGGAGACTGCTGGTTCTGACAAGCTTGTGAATGTTACTTCTTCCAAGACACATCCAACTTCTGCTGGAGAGATTACACACGCTTTCATGAAGAAGCAGTTCAATGTAGCACATGGAAATCAATTAATAAAGCAAGAAGAGAGAGAGATAGGAAACACAGGGTTGAAGCCTTACTTCCAATATCTGAATCAGGCAAAATGCTATGTATACTTCTCTGTGGCTACTCTTAGTCACCTTACATTTGTGACTTTCCAGATATTGCAAAACTCATGGATGGCTACTAATGTTGACAATCCCCATGTCAGCACGTTGCGATTGATTGTAGTTTACTTCTTGATTGGAGTTATTTCAATACATTTCATATTGTTCAGAAGTTTACTTCTTGTTTCTTTGGGTCTTCAATCGTCAAAGTATCTTTTTCTGCAGTTAATGAACTCACTTTTTCGTGCACCAATGTCATTTTATGACTCTACACCATTAGGAAGGATACTTAGTAGGGTCTCGTCAGATCTAAGCATTGTGGATCTTGATATCCCATTTAGCCTCACTTTTGTCGTGGGAGCTACTCTAAATTATTATTCAACTCTTACAGTTTTAGCAGTTGTCACTAAGCCAGTCTTGGTTATCTCTATACCGTTGGTGTATATTGTAATTCGCTTGCAGAGATACTACTTTGCCTCTGCTAAAGAAGTAATGCGGATGAATGGCACAACAAAATCATTTTTAGCTAATCATATTGCTGAAACTGTTGCTGGAGTTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTGTGAAGAATCTTGATTTAATTGATAACAATGCTAGTCCTTTCTTCCATGGTTTTGCCTCAAATGAGTGGTTGATCCTACATTTAGAAATTGTAGCTGCAGTTGTTCTTGCCTCCACAGCGCTTAGCCTGGTCTTGTTTCCATCTGGGACTTTCACATCTGGATTTATTGGCATGGCTCTCTCTTATGGCTTTACCCTAAACTCTTCCTTAATACTTTCAATTCAAAGTCAATGCCAACTTGCAAATTACATAATATCTGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAAGCTGAAGAAGTAATAAAAACAAAACGTCCTCCTTTGAATTGGCCAGATGAAGGTGAAGTAGAAATAAATGACTTGCAGGTACGATACAGGCTTGATGGACCACTTATACTCCATGGCATCACATGCACATTCAAAGCAGGCCACAAGATTGGAATTGTTGGCAGGACAGGTAGTGGGAAGTCCACTCTTATAGGTTCTTTATTTCGTCTTGTGGAGCCAGCAGGTGGAAAAATTGTAGTTGATGGCATAGACATCTCTTCTATTGGCCTTCATGACTTGAGGTCCCATTTTGGTGTTATACCTCAGGATCCAACCCTTTTTAATGGAACGGTTAGATATAATTTGGACCCTCTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAAGTTGTCCGAGAGAAAGAAGAGGGCTTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGCTATTTTGTTTGGGGCGTGCTATTTTGAGAAGTAGTAAGATATTGGTGCTGGATGAAGCAACAGCATCAATTGATAATGCAACTGATTTGATTCTTCAGAAAAACATTAGGACTGAATTTGCTGATTGTACTGTGATCACAGTAGCACACCGAATACCAACTGTGATGGATTGCTCTGTGGTTCTTTCAATAAGTGATGGAAAATTGGTTGAGTATGATGAGCCAGATACCTTGATGAAGACAGAAGGGTCGTTGTTCAGACAACTTGTCCAAGAATATTGGTCTCATTTTCAGTCTACATAA 4419 0.387 MEDFWSMICGDSVCSMTVGKLFCYEFMFLKDPSACINHLLIICFDVLLLFMLSFAMIHKSLSRPCRGLIRVERYSNLQLCSAITSASLGVLHLCLGIWVLEEKLRKNHTAFPLDWWLLELFQGFTWLFIGLTVSLRLKQLSTVWLWLFSILTFFVYGIFCVLSMSYSIRNKELSFKVALEVLSFPGSFLLLLCTYRVCKYEHTNRETNEGLYAPLTGQFNEVDPIRCVTPFANAGFCSRMLFSWLNPHMRKGKEKTLEDEDIPKLRELDRAESCYLSFEEQLMKQIEKDPSSHVSILRILILCHQKEILVSGFFALIKVLALSSGPLFLNAFMLVAEGNEGFKYEGYVLVISLLIIKIIESVSQRQWYFRSRLVGMKVRSLLTAAIYKKLLRLSNVARLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTILQIGIALVMLFRAIGMATIASLVVIVLTVLCNTPIAKLQHKFHSELMVAQDERLKASSEALVNMKVLKLYAWENHFKNAIERLRNVELKLLGAVQLRKAYNVFLFWASPVLVSAASFGVCYFLKIPLHANNVFTFVAALRIVQEPITTIPDVIGVVIQAKVAFTRIIKFLEAPELQSKNFRNKCFVNNLNDSILIRHADFSWEDSVLKPTLRNINLEVRHGQKVAICGEVGSGKSTLLSLILGEVPITKGTIEVYGKFAYVSQTAWIQTGTIQENILFGSDLDVKRYEETLHRSSLVKDLQLFPNGDLTEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSKDGFDTRQEYIMEGLKEKTVLLVTHQVDFLPAFDSVLLMSDGEILEAAPYHCLLSSSKEFQNLINAHKETAGSDKLVNVTSSKTHPTSAGEITHAFMKKQFNVAHGNQLIKQEEREIGNTGLKPYFQYLNQAKCYVYFSVATLSHLTFVTFQILQNSWMATNVDNPHVSTLRLIVVYFLIGVISIHFILFRSLLLVSLGLQSSKYLFLQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDIPFSLTFVVGATLNYYSTLTVLAVVTKPVLVISIPLVYIVIRLQRYYFASAKEVMRMNGTTKSFLANHIAETVAGVVTIRAFEEEDRFFVKNLDLIDNNASPFFHGFASNEWLILHLEIVAAVVLASTALSLVLFPSGTFTSGFIGMALSYGFTLNSSLILSIQSQCQLANYIISVERLNQYMHIQSEAEEVIKTKRPPLNWPDEGEVEINDLQVRYRLDGPLILHGITCTFKAGHKIGIVGRTGSGKSTLIGSLFRLVEPAGGKIVVDGIDISSIGLHDLRSHFGVIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQEVVREKEEGLNSSVVEDGSNWSMGQRQLFCLGRAILRSSKILVLDEATASIDNATDLILQKNIRTEFADCTVITVAHRIPTVMDCSVVLSISDGKLVEYDEPDTLMKTEGSLFRQLVQEYWSHFQST 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4809g00001 1472 FunFam ABC transporter C family member 10 292 605 - -
Mupr4809g00001 1472 Pfam ABC transporter 1246 1394 IPR003439 GO:0005524
Mupr4809g00001 1472 SMART AAA_5 1255 1438 IPR003593 GO:0016887
Mupr4809g00001 1472 SMART AAA_5 651 820 IPR003593 GO:0016887
Mupr4809g00001 1472 FunFam ABC transporter C family member 3 1212 1464 - -
Mupr4809g00001 1472 CDD ABC_6TM_ABCC_D2 915 1204 IPR044726 GO:0140359
Mupr4809g00001 1472 FunFam ABC transporter C family member 5 879 1210 - -
Mupr4809g00001 1472 Gene3D ABC transporter type 1, transmembrane domain 877 1211 IPR036640 GO:0005524|GO:0016020
Mupr4809g00001 1472 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Mupr4809g00001 1472 Gene3D - 1212 1465 IPR027417 -
Mupr4809g00001 1472 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Mupr4809g00001 1472 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4809g00001 1472 SUPERFAMILY ABC transporter transmembrane region 901 1211 IPR036640 GO:0005524|GO:0016020
Mupr4809g00001 1472 CDD ABCC_MRP_domain1 624 820 - -
Mupr4809g00001 1472 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Mupr4809g00001 1472 SUPERFAMILY ABC transporter transmembrane region 302 605 IPR036640 GO:0005524|GO:0016020
Mupr4809g00001 1472 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 843 IPR003439 GO:0005524
Mupr4809g00001 1472 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1229 1463 IPR003439 GO:0005524
Mupr4809g00001 1472 Gene3D - 601 862 IPR027417 -
Mupr4809g00001 1472 Gene3D ABC transporter type 1, transmembrane domain 300 600 IPR036640 GO:0005524|GO:0016020
Mupr4809g00001 1472 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 950 1192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4809g00001 1472 CDD ABCC_MRP_domain2 1227 1447 - -
Mupr4809g00001 1472 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1463 - -
Mupr4809g00001 1472 Pfam ABC transporter transmembrane region 309 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4809g00001 1472 Pfam ABC transporter transmembrane region 914 1174 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4809g00001 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1220 1462 IPR027417 -
Mupr4809g00001 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 843 IPR027417 -
Mupr4809g00001 1472 FunFam Multidrug resistance-associated protein 1 605 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4809g00001 Mupr-Chr4809 8103 14334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4809g00001 575 831 Calmodulin-binding Proteins AT2G36910 28.520 3.17e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4809g00001 K05666 - gmx:100787314 2250.32